Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1LP55160 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1LP55160 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1LP55160 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NCKAP1LP55160 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1LP55160 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1LP55160 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1LP55160 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.53■■□□□ 1.04
NCKAP1LP55160 AFG3L1P-217ENST00000557444 2447 ntBASIC21.53■■□□□ 1.04
NCKAP1LP55160 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1LP55160 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1LP55160 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
NCKAP1LP55160 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1LP55160 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1LP55160 C1QL1P1-201ENST00000568105 661 ntBASIC21.53■■□□□ 1.04
NCKAP1LP55160 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.53■■□□□ 1.04
NCKAP1LP55160 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.53■■□□□ 1.04
NCKAP1LP55160 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1LP55160 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1LP55160 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1LP55160 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1LP55160 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1LP55160 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.53■■□□□ 1.04
NCKAP1LP55160 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NCKAP1LP55160 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCKAP1LP55160 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCKAP1LP55160 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.52■■□□□ 1.04
NCKAP1LP55160 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.52■■□□□ 1.04
NCKAP1LP55160 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.52■■□□□ 1.04
NCKAP1LP55160 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NCKAP1LP55160 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCKAP1LP55160 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
NCKAP1LP55160 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
NCKAP1LP55160 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCKAP1LP55160 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCKAP1LP55160 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.52■■□□□ 1.04
NCKAP1LP55160 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
NCKAP1LP55160 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.52■■□□□ 1.04
NCKAP1LP55160 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.52■■□□□ 1.04
NCKAP1LP55160 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.52■■□□□ 1.04
NCKAP1LP55160 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NCKAP1LP55160 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
NCKAP1LP55160 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NCKAP1LP55160 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.52■■□□□ 1.04
NCKAP1LP55160 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.52■■□□□ 1.04
NCKAP1LP55160 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.52■■□□□ 1.04
NCKAP1LP55160 KRT8P8-201ENST00000434750 1448 ntBASIC21.52■■□□□ 1.04
NCKAP1LP55160 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
NCKAP1LP55160 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
NCKAP1LP55160 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
NCKAP1LP55160 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.52■■□□□ 1.03
NCKAP1LP55160 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.52■■□□□ 1.03
NCKAP1LP55160 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.51■■□□□ 1.03
NCKAP1LP55160 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
NCKAP1LP55160 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKAP1LP55160 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKAP1LP55160 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NCKAP1LP55160 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NCKAP1LP55160 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NCKAP1LP55160 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKAP1LP55160 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKAP1LP55160 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKAP1LP55160 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKAP1LP55160 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
NCKAP1LP55160 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKAP1LP55160 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NCKAP1LP55160 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKAP1LP55160 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKAP1LP55160 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKAP1LP55160 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.51■■□□□ 1.03
NCKAP1LP55160 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.51■■□□□ 1.03
NCKAP1LP55160 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NCKAP1LP55160 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.51■■□□□ 1.03
NCKAP1LP55160 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
NCKAP1LP55160 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
NCKAP1LP55160 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.51■■□□□ 1.03
NCKAP1LP55160 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.51■■□□□ 1.03
NCKAP1LP55160 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCKAP1LP55160 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.5■■□□□ 1.03
NCKAP1LP55160 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCKAP1LP55160 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.5■■□□□ 1.03
NCKAP1LP55160 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NCKAP1LP55160 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NCKAP1LP55160 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.5■■□□□ 1.03
NCKAP1LP55160 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.5■■□□□ 1.03
NCKAP1LP55160 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCKAP1LP55160 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
NCKAP1LP55160 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCKAP1LP55160 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.5■■□□□ 1.03
NCKAP1LP55160 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.5■■□□□ 1.03
NCKAP1LP55160 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NCKAP1LP55160 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NCKAP1LP55160 RARRES2P10-201ENST00000564312 460 ntBASIC21.5■■□□□ 1.03
NCKAP1LP55160 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NCKAP1LP55160 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.5■■□□□ 1.03
NCKAP1LP55160 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NCKAP1LP55160 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NCKAP1LP55160 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.49■■□□□ 1.03
NCKAP1LP55160 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NCKAP1LP55160 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms