Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN5P54829 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN5P54829 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PTPN5P54829 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN5P54829 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.29■□□□□ 0.84
PTPN5P54829 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN5P54829 KRT16P1-201ENST00000399124 1418 ntBASIC20.29■□□□□ 0.84
PTPN5P54829 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN5P54829 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN5P54829 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN5P54829 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN5P54829 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PTPN5P54829 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN5P54829 FAM86EP-206ENST00000510506 987 ntBASIC20.29■□□□□ 0.84
PTPN5P54829 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN5P54829 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.29■□□□□ 0.84
PTPN5P54829 AC023511.2-201ENST00000618803 211 ntBASIC20.29■□□□□ 0.84
PTPN5P54829 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.29■□□□□ 0.84
PTPN5P54829 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN5P54829 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN5P54829 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN5P54829 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN5P54829 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PTPN5P54829 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN5P54829 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN5P54829 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PTPN5P54829 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN5P54829 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PTPN5P54829 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN5P54829 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN5P54829 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.28■□□□□ 0.84
PTPN5P54829 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN5P54829 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.28■□□□□ 0.84
PTPN5P54829 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.28■□□□□ 0.84
PTPN5P54829 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN5P54829 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PTPN5P54829 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN5P54829 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN5P54829 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN5P54829 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN5P54829 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.28■□□□□ 0.84
PTPN5P54829 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.28■□□□□ 0.84
PTPN5P54829 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.27■□□□□ 0.84
PTPN5P54829 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN5P54829 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.27■□□□□ 0.84
PTPN5P54829 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN5P54829 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN5P54829 KRT18P16-201ENST00000510337 1294 ntBASIC20.27■□□□□ 0.84
PTPN5P54829 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
PTPN5P54829 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PTPN5P54829 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN5P54829 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN5P54829 AC139887.4-201ENST00000607877 719 ntBASIC20.27■□□□□ 0.84
PTPN5P54829 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN5P54829 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN5P54829 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN5P54829 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.27■□□□□ 0.83
PTPN5P54829 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN5P54829 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
PTPN5P54829 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN5P54829 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN5P54829 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
PTPN5P54829 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN5P54829 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
PTPN5P54829 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PTPN5P54829 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN5P54829 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PTPN5P54829 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN5P54829 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PTPN5P54829 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN5P54829 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PTPN5P54829 NIFKP9-201ENST00000419265 221 ntBASIC20.26■□□□□ 0.83
PTPN5P54829 TSPY5P-201ENST00000426936 936 ntBASIC20.26■□□□□ 0.83
PTPN5P54829 AP005242.2-201ENST00000580065 1175 ntBASIC20.26■□□□□ 0.83
PTPN5P54829 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPN5P54829 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN5P54829 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN5P54829 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN5P54829 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN5P54829 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN5P54829 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN5P54829 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN5P54829 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms