Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLR2JP52435 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLR2JP52435 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLR2JP52435 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2JP52435 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
POLR2JP52435 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2JP52435 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2JP52435 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
POLR2JP52435 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2JP52435 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2JP52435 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
POLR2JP52435 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2JP52435 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2JP52435 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.76■□□□□ 0.59
POLR2JP52435 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2JP52435 AL355472.2-201ENST00000422958 438 ntBASIC18.76■□□□□ 0.59
POLR2JP52435 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2JP52435 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.76■□□□□ 0.59
POLR2JP52435 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.76■□□□□ 0.59
POLR2JP52435 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
POLR2JP52435 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2JP52435 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2JP52435 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2JP52435 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.76■□□□□ 0.59
POLR2JP52435 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2JP52435 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2JP52435 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2JP52435 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
POLR2JP52435 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR2JP52435 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.75■□□□□ 0.59
POLR2JP52435 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR2JP52435 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR2JP52435 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR2JP52435 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
POLR2JP52435 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
POLR2JP52435 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.75■□□□□ 0.59
POLR2JP52435 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR2JP52435 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR2JP52435 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR2JP52435 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
POLR2JP52435 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.75■□□□□ 0.59
POLR2JP52435 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR2JP52435 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.75■□□□□ 0.59
POLR2JP52435 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.75■□□□□ 0.59
POLR2JP52435 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR2JP52435 AC069236.1-201ENST00000604339 616 ntBASIC18.75■□□□□ 0.59
POLR2JP52435 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.75■□□□□ 0.59
POLR2JP52435 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.75■□□□□ 0.59
POLR2JP52435 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.75■□□□□ 0.59
POLR2JP52435 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.75■□□□□ 0.59
POLR2JP52435 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.75■□□□□ 0.59
POLR2JP52435 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
POLR2JP52435 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.75■□□□□ 0.59
POLR2JP52435 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
POLR2JP52435 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
POLR2JP52435 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
POLR2JP52435 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.74■□□□□ 0.59
POLR2JP52435 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2JP52435 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2JP52435 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.74■□□□□ 0.59
POLR2JP52435 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2JP52435 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2JP52435 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.74■□□□□ 0.59
POLR2JP52435 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2JP52435 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.74■□□□□ 0.59
POLR2JP52435 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.74■□□□□ 0.59
POLR2JP52435 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.74■□□□□ 0.59
POLR2JP52435 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR2JP52435 C2orf69P4-201ENST00000565394 541 ntBASIC18.74■□□□□ 0.59
POLR2JP52435 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.74■□□□□ 0.59
POLR2JP52435 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2JP52435 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2JP52435 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2JP52435 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2JP52435 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2JP52435 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
POLR2JP52435 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2JP52435 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2JP52435 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2JP52435 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR2JP52435 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2JP52435 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR2JP52435 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2JP52435 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2JP52435 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
POLR2JP52435 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2JP52435 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2JP52435 CYP2T1P-201ENST00000432607 1285 ntBASIC18.73■□□□□ 0.59
POLR2JP52435 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.73■□□□□ 0.59
POLR2JP52435 AL589743.5-201ENST00000616611 1050 ntBASIC18.73■□□□□ 0.59
POLR2JP52435 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR2JP52435 AC008694.1-202ENST00000636953 945 ntBASIC18.73■□□□□ 0.59
POLR2JP52435 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR2JP52435 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.73■□□□□ 0.59
POLR2JP52435 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2JP52435 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2JP52435 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2JP52435 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2JP52435 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2JP52435 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms