Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SLC9A3P48764 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC9A3P48764 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC9A3P48764 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC9A3P48764 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC9A3P48764 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC9A3P48764 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC9A3P48764 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC9A3P48764 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC9A3P48764 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SLC9A3P48764 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC9A3P48764 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC9A3P48764 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SLC9A3P48764 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 AL355472.2-201ENST00000422958 438 ntBASIC17.94■□□□□ 0.46
SLC9A3P48764 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC9A3P48764 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC9A3P48764 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC9A3P48764 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC9A3P48764 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC9A3P48764 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC9A3P48764 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC9A3P48764 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC9A3P48764 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
SLC9A3P48764 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC9A3P48764 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC9A3P48764 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC9A3P48764 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SLC9A3P48764 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SLC9A3P48764 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
SLC9A3P48764 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
SLC9A3P48764 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC9A3P48764 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC9A3P48764 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC9A3P48764 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC9A3P48764 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SLC9A3P48764 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC9A3P48764 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SLC9A3P48764 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC9A3P48764 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC9A3P48764 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC9A3P48764 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SLC9A3P48764 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SLC9A3P48764 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC9A3P48764 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC9A3P48764 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SLC9A3P48764 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC9A3P48764 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC9A3P48764 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.93■□□□□ 0.46
SLC9A3P48764 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC9A3P48764 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.93■□□□□ 0.46
SLC9A3P48764 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC9A3P48764 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC9A3P48764 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC9A3P48764 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC9A3P48764 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SLC9A3P48764 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC9A3P48764 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC9A3P48764 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC9A3P48764 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC9A3P48764 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC9A3P48764 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC9A3P48764 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SLC9A3P48764 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC9A3P48764 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC9A3P48764 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC9A3P48764 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC9A3P48764 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC9A3P48764 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC9A3P48764 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC9A3P48764 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC9A3P48764 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC9A3P48764 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC9A3P48764 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC9A3P48764 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC9A3P48764 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC9A3P48764 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC9A3P48764 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC9A3P48764 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC9A3P48764 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms