Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A6P48664 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A6P48664 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A6P48664 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC1A6P48664 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
SLC1A6P48664 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC1A6P48664 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A6P48664 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SLC1A6P48664 AIRN-201ENST00000601203 4374 ntBASIC19.28■□□□□ 0.68
SLC1A6P48664 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A6P48664 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A6P48664 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A6P48664 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.28■□□□□ 0.68
SLC1A6P48664 AC100791.3-201ENST00000617619 330 ntBASIC19.28■□□□□ 0.68
SLC1A6P48664 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A6P48664 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A6P48664 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A6P48664 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A6P48664 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC1A6P48664 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A6P48664 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A6P48664 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SLC1A6P48664 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A6P48664 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A6P48664 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SLC1A6P48664 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A6P48664 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A6P48664 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SLC1A6P48664 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC1A6P48664 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC1A6P48664 AC007322.4-201ENST00000509611 723 ntBASIC19.27■□□□□ 0.68
SLC1A6P48664 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.27■□□□□ 0.68
SLC1A6P48664 AC105020.6-201ENST00000621523 1217 ntBASIC19.27■□□□□ 0.68
SLC1A6P48664 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A6P48664 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC1A6P48664 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SLC1A6P48664 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC1A6P48664 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.27■□□□□ 0.67
SLC1A6P48664 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC1A6P48664 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SLC1A6P48664 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC1A6P48664 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
SLC1A6P48664 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SLC1A6P48664 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC1A6P48664 MFSD11-216ENST00000590393 1141 ntBASIC19.26■□□□□ 0.67
SLC1A6P48664 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC1A6P48664 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SLC1A6P48664 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
SLC1A6P48664 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC1A6P48664 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC1A6P48664 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
SLC1A6P48664 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC1A6P48664 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC1A6P48664 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A6P48664 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC1A6P48664 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SLC1A6P48664 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A6P48664 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SLC1A6P48664 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A6P48664 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A6P48664 AL161938.1-201ENST00000569833 2180 ntBASIC19.25■□□□□ 0.67
SLC1A6P48664 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC1A6P48664 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A6P48664 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A6P48664 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC1A6P48664 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A6P48664 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC1A6P48664 AC013268.1-206ENST00000638368 961 ntBASIC19.25■□□□□ 0.67
SLC1A6P48664 AC112229.1-201ENST00000639295 961 ntBASIC19.25■□□□□ 0.67
SLC1A6P48664 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SLC1A6P48664 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A6P48664 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A6P48664 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLC1A6P48664 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A6P48664 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A6P48664 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A6P48664 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A6P48664 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.25■□□□□ 0.67
SLC1A6P48664 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A6P48664 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC1A6P48664 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A6P48664 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SLC1A6P48664 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC1A6P48664 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms