Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.68■□□□□ 0.9
RFC1P35251 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC1P35251 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.68■□□□□ 0.9
RFC1P35251 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RFC1P35251 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC1P35251 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.67■□□□□ 0.9
RFC1P35251 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC1P35251 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.67■□□□□ 0.9
RFC1P35251 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC1P35251 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC1P35251 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC1P35251 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.67■□□□□ 0.9
RFC1P35251 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RFC1P35251 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RFC1P35251 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.67■□□□□ 0.9
RFC1P35251 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RFC1P35251 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC1P35251 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RFC1P35251 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC1P35251 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC1P35251 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC1P35251 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.67■□□□□ 0.9
RFC1P35251 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.67■□□□□ 0.9
RFC1P35251 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RFC1P35251 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.67■□□□□ 0.9
RFC1P35251 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.67■□□□□ 0.9
RFC1P35251 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC1P35251 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RFC1P35251 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.67■□□□□ 0.9
RFC1P35251 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.67■□□□□ 0.9
RFC1P35251 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.67■□□□□ 0.9
RFC1P35251 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RFC1P35251 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC1P35251 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC1P35251 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC1P35251 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC1P35251 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RFC1P35251 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC1P35251 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC1P35251 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC1P35251 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC1P35251 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC1P35251 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.66■□□□□ 0.9
RFC1P35251 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC1P35251 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.66■□□□□ 0.9
RFC1P35251 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC1P35251 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.66■□□□□ 0.9
RFC1P35251 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.66■□□□□ 0.9
RFC1P35251 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC1P35251 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC1P35251 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC1P35251 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC1P35251 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.66■□□□□ 0.9
RFC1P35251 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC1P35251 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC1P35251 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
RFC1P35251 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.66■□□□□ 0.9
RFC1P35251 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC1P35251 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.66■□□□□ 0.9
RFC1P35251 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC1P35251 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC1P35251 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.66■□□□□ 0.9
RFC1P35251 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC1P35251 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC1P35251 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFC1P35251 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.65■□□□□ 0.9
RFC1P35251 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC1P35251 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC1P35251 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC1P35251 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.65■□□□□ 0.9
RFC1P35251 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFC1P35251 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC1P35251 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC1P35251 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RFC1P35251 UNC93B4-201ENST00000505679 747 ntBASIC20.65■□□□□ 0.9
RFC1P35251 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.65■□□□□ 0.9
RFC1P35251 UNC93B5-201ENST00000530315 699 ntBASIC20.65■□□□□ 0.9
RFC1P35251 AC008687.6-201ENST00000596318 630 ntBASIC20.65■□□□□ 0.9
RFC1P35251 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
RFC1P35251 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.65■□□□□ 0.9
RFC1P35251 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.65■□□□□ 0.9
RFC1P35251 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC1P35251 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC1P35251 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC1P35251 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC1P35251 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC1P35251 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFC1P35251 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC1P35251 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC1P35251 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.64■□□□□ 0.9
RFC1P35251 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
RFC1P35251 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.64■□□□□ 0.9
RFC1P35251 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms