Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
GDF1P27539 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
GDF1P27539 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDF1P27539 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GDF1P27539 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.82■□□□□ 0.44
GDF1P27539 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF1P27539 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GDF1P27539 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF1P27539 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF1P27539 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.81■□□□□ 0.44
GDF1P27539 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.81■□□□□ 0.44
GDF1P27539 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
GDF1P27539 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF1P27539 FAM197Y1-201ENST00000421178 764 ntBASIC17.81■□□□□ 0.44
GDF1P27539 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF1P27539 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
GDF1P27539 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF1P27539 KRT18P16-201ENST00000510337 1294 ntBASIC17.81■□□□□ 0.44
GDF1P27539 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.81■□□□□ 0.44
GDF1P27539 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GDF1P27539 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.81■□□□□ 0.44
GDF1P27539 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.81■□□□□ 0.44
GDF1P27539 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF1P27539 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GDF1P27539 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
GDF1P27539 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF1P27539 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GDF1P27539 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
GDF1P27539 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.81■□□□□ 0.44
GDF1P27539 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
GDF1P27539 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF1P27539 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF1P27539 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
GDF1P27539 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
GDF1P27539 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.8■□□□□ 0.44
GDF1P27539 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
GDF1P27539 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
GDF1P27539 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.8■□□□□ 0.44
GDF1P27539 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 AL355355.2-201ENST00000442321 338 ntBASIC17.8■□□□□ 0.44
GDF1P27539 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.8■□□□□ 0.44
GDF1P27539 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.8■□□□□ 0.44
GDF1P27539 C1QL1P1-201ENST00000568105 661 ntBASIC17.8■□□□□ 0.44
GDF1P27539 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.8■□□□□ 0.44
GDF1P27539 AL353708.3-201ENST00000610272 989 ntBASIC17.8■□□□□ 0.44
GDF1P27539 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.8■□□□□ 0.44
GDF1P27539 AL691432.2-201ENST00000607222 2038 ntBASIC17.8■□□□□ 0.44
GDF1P27539 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.8■□□□□ 0.44
GDF1P27539 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF1P27539 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
GDF1P27539 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.79■□□□□ 0.44
GDF1P27539 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
GDF1P27539 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.79■□□□□ 0.44
GDF1P27539 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
GDF1P27539 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.79■□□□□ 0.44
GDF1P27539 NIFKP9-201ENST00000419265 221 ntBASIC17.79■□□□□ 0.44
GDF1P27539 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.79■□□□□ 0.44
GDF1P27539 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.79■□□□□ 0.44
GDF1P27539 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.79■□□□□ 0.44
GDF1P27539 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.79■□□□□ 0.44
GDF1P27539 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
GDF1P27539 AC026471.5-201ENST00000615068 467 ntBASIC17.79■□□□□ 0.44
GDF1P27539 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.79■□□□□ 0.44
GDF1P27539 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.79■□□□□ 0.44
GDF1P27539 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.79■□□□□ 0.44
GDF1P27539 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.79■□□□□ 0.44
GDF1P27539 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.79■□□□□ 0.44
GDF1P27539 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF1P27539 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms