Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
KCNA3P22001 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC24.2■■□□□ 1.46
KCNA3P22001 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
KCNA3P22001 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
KCNA3P22001 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
KCNA3P22001 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
KCNA3P22001 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.19■■□□□ 1.46
KCNA3P22001 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
KCNA3P22001 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
KCNA3P22001 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
KCNA3P22001 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
KCNA3P22001 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
KCNA3P22001 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
KCNA3P22001 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC24.19■■□□□ 1.46
KCNA3P22001 GUSBP5-202ENST00000510805 1989 ntBASIC24.19■■□□□ 1.46
KCNA3P22001 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
KCNA3P22001 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24.18■■□□□ 1.46
KCNA3P22001 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.18■■□□□ 1.46
KCNA3P22001 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC24.18■■□□□ 1.46
KCNA3P22001 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC24.18■■□□□ 1.46
KCNA3P22001 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
KCNA3P22001 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
KCNA3P22001 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC24.18■■□□□ 1.46
KCNA3P22001 Telomerase-vert.1-201ENST00000363312 438 ntBASIC24.18■■□□□ 1.46
KCNA3P22001 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KCNA3P22001 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KCNA3P22001 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
KCNA3P22001 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC24.18■■□□□ 1.46
KCNA3P22001 CR769767.2-201ENST00000622735 460 ntBASIC24.18■■□□□ 1.46
KCNA3P22001 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.18■■□□□ 1.46
KCNA3P22001 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
KCNA3P22001 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
KCNA3P22001 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KCNA3P22001 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.17■■□□□ 1.46
KCNA3P22001 AC244015.2-201ENST00000616358 1861 ntBASIC24.17■■□□□ 1.46
KCNA3P22001 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
KCNA3P22001 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KCNA3P22001 AL049796.1-201ENST00000565336 1766 ntBASIC24.17■■□□□ 1.46
KCNA3P22001 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC24.17■■□□□ 1.46
KCNA3P22001 STARP1-201ENST00000397973 869 ntBASIC24.17■■□□□ 1.46
KCNA3P22001 AL845331.1-201ENST00000424978 1190 ntBASIC24.17■■□□□ 1.46
KCNA3P22001 SDHD-206ENST00000528182 754 ntTSL 3 BASIC24.17■■□□□ 1.46
KCNA3P22001 NT5C-210ENST00000582160 860 ntTSL 2 BASIC24.17■■□□□ 1.46
KCNA3P22001 AC092119.3-201ENST00000612618 583 ntBASIC24.17■■□□□ 1.46
KCNA3P22001 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KCNA3P22001 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KCNA3P22001 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KCNA3P22001 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.17■■□□□ 1.46
KCNA3P22001 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
KCNA3P22001 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.17■■□□□ 1.46
KCNA3P22001 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
KCNA3P22001 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNA3P22001 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC24.16■■□□□ 1.46
KCNA3P22001 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNA3P22001 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNA3P22001 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC24.16■■□□□ 1.46
KCNA3P22001 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC24.16■■□□□ 1.46
KCNA3P22001 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
KCNA3P22001 KRT17P6-201ENST00000453795 1220 ntBASIC24.16■■□□□ 1.46
KCNA3P22001 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC24.16■■□□□ 1.46
KCNA3P22001 UNC93B7-201ENST00000509439 705 ntBASIC24.16■■□□□ 1.46
KCNA3P22001 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.16■■□□□ 1.46
KCNA3P22001 LINC01311-201ENST00000565162 1445 ntBASIC24.16■■□□□ 1.46
KCNA3P22001 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC24.16■■□□□ 1.46
KCNA3P22001 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC24.16■■□□□ 1.46
KCNA3P22001 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC24.15■■□□□ 1.46
KCNA3P22001 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
KCNA3P22001 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC24.15■■□□□ 1.46
KCNA3P22001 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
KCNA3P22001 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
KCNA3P22001 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC24.15■■□□□ 1.46
KCNA3P22001 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
KCNA3P22001 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC24.15■■□□□ 1.46
KCNA3P22001 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
KCNA3P22001 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
KCNA3P22001 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC24.15■■□□□ 1.46
KCNA3P22001 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
KCNA3P22001 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.15■■□□□ 1.46
KCNA3P22001 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KCNA3P22001 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.14■■□□□ 1.46
KCNA3P22001 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
KCNA3P22001 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.14■■□□□ 1.46
KCNA3P22001 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KCNA3P22001 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
KCNA3P22001 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KCNA3P22001 GLRB-205ENST00000512619 728 ntTSL 3 BASIC24.14■■□□□ 1.45
KCNA3P22001 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
KCNA3P22001 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
KCNA3P22001 PRR29-207ENST00000580752 458 ntTSL 3 BASIC24.14■■□□□ 1.45
KCNA3P22001 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC24.14■■□□□ 1.45
KCNA3P22001 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC24.14■■□□□ 1.45
KCNA3P22001 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.14■■□□□ 1.45
KCNA3P22001 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
KCNA3P22001 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
KCNA3P22001 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.14■■□□□ 1.45
KCNA3P22001 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC24.14■■□□□ 1.45
KCNA3P22001 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
KCNA3P22001 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC24.13■■□□□ 1.45
KCNA3P22001 AL024507.2-201ENST00000606070 2574 ntBASIC24.13■■□□□ 1.45
KCNA3P22001 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms