Protein–RNA interactions for Protein: P20827

EFNA1, Ephrin-A1, humanhuman

Predicted RBP Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1P20827 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EFNA1P20827 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EFNA1P20827 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
EFNA1P20827 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.68■□□□□ 0.58
EFNA1P20827 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.68■□□□□ 0.58
EFNA1P20827 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EFNA1P20827 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EFNA1P20827 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
EFNA1P20827 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.68■□□□□ 0.58
EFNA1P20827 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EFNA1P20827 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EFNA1P20827 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
EFNA1P20827 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.68■□□□□ 0.58
EFNA1P20827 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.68■□□□□ 0.58
EFNA1P20827 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
EFNA1P20827 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
EFNA1P20827 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
EFNA1P20827 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
EFNA1P20827 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
EFNA1P20827 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EFNA1P20827 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFNA1P20827 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.67■□□□□ 0.58
EFNA1P20827 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFNA1P20827 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.67■□□□□ 0.58
EFNA1P20827 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
EFNA1P20827 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.67■□□□□ 0.58
EFNA1P20827 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EFNA1P20827 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EFNA1P20827 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFNA1P20827 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.67■□□□□ 0.58
EFNA1P20827 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
EFNA1P20827 AC006970.2-201ENST00000450065 779 ntBASIC18.67■□□□□ 0.58
EFNA1P20827 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.67■□□□□ 0.58
EFNA1P20827 AC083906.2-201ENST00000511578 360 ntBASIC18.67■□□□□ 0.58
EFNA1P20827 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
EFNA1P20827 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EFNA1P20827 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
EFNA1P20827 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFNA1P20827 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFNA1P20827 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EFNA1P20827 AP001271.2-201ENST00000624018 1556 ntBASIC18.67■□□□□ 0.58
EFNA1P20827 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EFNA1P20827 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.67■□□□□ 0.58
EFNA1P20827 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
EFNA1P20827 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
EFNA1P20827 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA1P20827 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
EFNA1P20827 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
EFNA1P20827 AP000974.1-201ENST00000623909 2387 ntBASIC18.66■□□□□ 0.58
EFNA1P20827 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA1P20827 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.66■□□□□ 0.58
EFNA1P20827 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA1P20827 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.66■□□□□ 0.58
EFNA1P20827 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA1P20827 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.66■□□□□ 0.58
EFNA1P20827 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
EFNA1P20827 AC023632.3-201ENST00000521633 145 ntBASIC18.66■□□□□ 0.58
EFNA1P20827 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA1P20827 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.66■□□□□ 0.58
EFNA1P20827 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.66■□□□□ 0.58
EFNA1P20827 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA1P20827 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.66■□□□□ 0.58
EFNA1P20827 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA1P20827 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
EFNA1P20827 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
EFNA1P20827 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA1P20827 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA1P20827 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA1P20827 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.66■□□□□ 0.58
EFNA1P20827 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA1P20827 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
EFNA1P20827 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA1P20827 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA1P20827 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA1P20827 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA1P20827 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA1P20827 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.65■□□□□ 0.58
EFNA1P20827 MIPEPP3-201ENST00000412105 444 ntBASIC18.65■□□□□ 0.58
EFNA1P20827 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.65■□□□□ 0.58
EFNA1P20827 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA1P20827 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.65■□□□□ 0.58
EFNA1P20827 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.65■□□□□ 0.58
EFNA1P20827 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA1P20827 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA1P20827 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EFNA1P20827 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.65■□□□□ 0.58
EFNA1P20827 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA1P20827 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA1P20827 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
EFNA1P20827 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA1P20827 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA1P20827 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA1P20827 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.65■□□□□ 0.58
EFNA1P20827 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.65■□□□□ 0.58
EFNA1P20827 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA1P20827 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
EFNA1P20827 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.65■□□□□ 0.58
EFNA1P20827 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA1P20827 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
EFNA1P20827 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms