Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCL4P13236 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CCL4P13236 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.58■□□□□ 0.56
CCL4P13236 AC087388.1-201ENST00000571370 1112 ntBASIC18.58■□□□□ 0.56
CCL4P13236 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.58■□□□□ 0.56
CCL4P13236 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.58■□□□□ 0.56
CCL4P13236 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CCL4P13236 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.58■□□□□ 0.56
CCL4P13236 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.58■□□□□ 0.56
CCL4P13236 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCL4P13236 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCL4P13236 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
CCL4P13236 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CCL4P13236 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCL4P13236 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL4P13236 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.57■□□□□ 0.56
CCL4P13236 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL4P13236 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CCL4P13236 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.57■□□□□ 0.56
CCL4P13236 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.57■□□□□ 0.56
CCL4P13236 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL4P13236 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.57■□□□□ 0.56
CCL4P13236 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.57■□□□□ 0.56
CCL4P13236 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CCL4P13236 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL4P13236 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL4P13236 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL4P13236 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCL4P13236 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL4P13236 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL4P13236 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCL4P13236 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCL4P13236 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.57■□□□□ 0.56
CCL4P13236 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.57■□□□□ 0.56
CCL4P13236 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CCL4P13236 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL4P13236 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCL4P13236 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL4P13236 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCL4P13236 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCL4P13236 BX119927.1-201ENST00000636596 1552 ntBASIC18.56■□□□□ 0.56
CCL4P13236 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CCL4P13236 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL4P13236 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL4P13236 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL4P13236 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL4P13236 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.56■□□□□ 0.56
CCL4P13236 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.56■□□□□ 0.56
CCL4P13236 MFAP1P1-201ENST00000442257 1255 ntBASIC18.56■□□□□ 0.56
CCL4P13236 FAM207BP-201ENST00000447172 505 ntBASIC18.56■□□□□ 0.56
CCL4P13236 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.56■□□□□ 0.56
CCL4P13236 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.56■□□□□ 0.56
CCL4P13236 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL4P13236 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCL4P13236 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL4P13236 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL4P13236 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCL4P13236 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCL4P13236 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCL4P13236 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL4P13236 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.55■□□□□ 0.56
CCL4P13236 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL4P13236 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.55■□□□□ 0.56
CCL4P13236 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.55■□□□□ 0.56
CCL4P13236 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL4P13236 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCL4P13236 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL4P13236 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL4P13236 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.55■□□□□ 0.56
CCL4P13236 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL4P13236 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL4P13236 AC091390.4-202ENST00000476426 537 ntBASIC18.55■□□□□ 0.56
CCL4P13236 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL4P13236 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCL4P13236 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCL4P13236 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL4P13236 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.54■□□□□ 0.56
CCL4P13236 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL4P13236 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL4P13236 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCL4P13236 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.54■□□□□ 0.56
CCL4P13236 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.54■□□□□ 0.56
CCL4P13236 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL4P13236 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCL4P13236 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.54■□□□□ 0.56
CCL4P13236 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.54■□□□□ 0.56
CCL4P13236 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL4P13236 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCL4P13236 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL4P13236 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL4P13236 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCL4P13236 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL4P13236 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL4P13236 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCL4P13236 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.54■□□□□ 0.56
CCL4P13236 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCL4P13236 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL4P13236 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL4P13236 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.53■□□□□ 0.56
CCL4P13236 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms