Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM228BP0C875 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.94■□□□□ 0.94
FAM228BP0C875 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FAM228BP0C875 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.94■□□□□ 0.94
FAM228BP0C875 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM228BP0C875 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.94■□□□□ 0.94
FAM228BP0C875 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM228BP0C875 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM228BP0C875 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.94■□□□□ 0.94
FAM228BP0C875 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM228BP0C875 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM228BP0C875 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
FAM228BP0C875 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FAM228BP0C875 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.93■□□□□ 0.94
FAM228BP0C875 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM228BP0C875 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FAM228BP0C875 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.93■□□□□ 0.94
FAM228BP0C875 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.93■□□□□ 0.94
FAM228BP0C875 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FAM228BP0C875 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FAM228BP0C875 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
FAM228BP0C875 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.93■□□□□ 0.94
FAM228BP0C875 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.93■□□□□ 0.94
FAM228BP0C875 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.93■□□□□ 0.94
FAM228BP0C875 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM228BP0C875 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM228BP0C875 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM228BP0C875 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
FAM228BP0C875 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FAM228BP0C875 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FAM228BP0C875 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
FAM228BP0C875 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.93■□□□□ 0.94
FAM228BP0C875 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
FAM228BP0C875 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FAM228BP0C875 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
FAM228BP0C875 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FAM228BP0C875 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FAM228BP0C875 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
FAM228BP0C875 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FAM228BP0C875 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.92■□□□□ 0.94
FAM228BP0C875 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.92■□□□□ 0.94
FAM228BP0C875 RAP2CP1-201ENST00000605103 478 ntBASIC20.92■□□□□ 0.94
FAM228BP0C875 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
FAM228BP0C875 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
FAM228BP0C875 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
FAM228BP0C875 TFP1-202ENST00000475455 1573 ntBASIC20.92■□□□□ 0.94
FAM228BP0C875 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.92■□□□□ 0.94
FAM228BP0C875 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FAM228BP0C875 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
FAM228BP0C875 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
FAM228BP0C875 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
FAM228BP0C875 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FAM228BP0C875 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM228BP0C875 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM228BP0C875 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM228BP0C875 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM228BP0C875 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM228BP0C875 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FAM228BP0C875 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM228BP0C875 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.91■□□□□ 0.94
FAM228BP0C875 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
FAM228BP0C875 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM228BP0C875 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM228BP0C875 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
FAM228BP0C875 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.91■□□□□ 0.94
FAM228BP0C875 LINC01465-201ENST00000408887 1940 ntBASIC20.91■□□□□ 0.94
FAM228BP0C875 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
FAM228BP0C875 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.91■□□□□ 0.94
FAM228BP0C875 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.91■□□□□ 0.94
FAM228BP0C875 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
FAM228BP0C875 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
FAM228BP0C875 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
FAM228BP0C875 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM228BP0C875 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM228BP0C875 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM228BP0C875 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM228BP0C875 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.9■□□□□ 0.94
FAM228BP0C875 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FAM228BP0C875 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.9■□□□□ 0.94
FAM228BP0C875 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
FAM228BP0C875 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FAM228BP0C875 MIR663A-201ENST00000385250 93 ntBASIC20.9■□□□□ 0.94
FAM228BP0C875 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
FAM228BP0C875 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FAM228BP0C875 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM228BP0C875 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FAM228BP0C875 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.9■□□□□ 0.94
FAM228BP0C875 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FAM228BP0C875 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
FAM228BP0C875 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
FAM228BP0C875 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.89■□□□□ 0.94
FAM228BP0C875 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
FAM228BP0C875 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.89■□□□□ 0.94
FAM228BP0C875 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
FAM228BP0C875 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.89■□□□□ 0.94
FAM228BP0C875 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.89■□□□□ 0.94
FAM228BP0C875 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.89■□□□□ 0.93
FAM228BP0C875 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.89■□□□□ 0.93
FAM228BP0C875 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.89■□□□□ 0.93
FAM228BP0C875 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms