Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CLTAP09496 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLTAP09496 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLTAP09496 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLTAP09496 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.46■■□□□ 1.03
CLTAP09496 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLTAP09496 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLTAP09496 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
CLTAP09496 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
CLTAP09496 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.46■■□□□ 1.03
CLTAP09496 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLTAP09496 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.46■■□□□ 1.03
CLTAP09496 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.46■■□□□ 1.03
CLTAP09496 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLTAP09496 TCF3P1-201ENST00000423021 1937 ntBASIC21.46■■□□□ 1.03
CLTAP09496 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLTAP09496 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
CLTAP09496 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLTAP09496 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLTAP09496 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLTAP09496 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.46■■□□□ 1.03
CLTAP09496 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLTAP09496 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.46■■□□□ 1.03
CLTAP09496 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CLTAP09496 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLTAP09496 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLTAP09496 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.45■■□□□ 1.02
CLTAP09496 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.45■■□□□ 1.02
CLTAP09496 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CLTAP09496 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.45■■□□□ 1.02
CLTAP09496 AP006587.1-201ENST00000534129 1502 ntBASIC21.45■■□□□ 1.02
CLTAP09496 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CLTAP09496 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.45■■□□□ 1.02
CLTAP09496 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.45■■□□□ 1.02
CLTAP09496 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLTAP09496 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLTAP09496 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CLTAP09496 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.45■■□□□ 1.02
CLTAP09496 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CLTAP09496 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLTAP09496 KRT16P5-201ENST00000455284 522 ntBASIC21.45■■□□□ 1.02
CLTAP09496 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.45■■□□□ 1.02
CLTAP09496 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLTAP09496 AC008550.1-201ENST00000511500 884 ntBASIC21.45■■□□□ 1.02
CLTAP09496 AC093827.2-201ENST00000512654 315 ntBASIC21.45■■□□□ 1.02
CLTAP09496 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLTAP09496 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.45■■□□□ 1.02
CLTAP09496 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.45■■□□□ 1.02
CLTAP09496 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLTAP09496 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLTAP09496 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLTAP09496 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLTAP09496 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLTAP09496 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.45■■□□□ 1.02
CLTAP09496 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLTAP09496 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.44■■□□□ 1.02
CLTAP09496 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.44■■□□□ 1.02
CLTAP09496 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.44■■□□□ 1.02
CLTAP09496 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLTAP09496 AC004264.1-201ENST00000608354 794 ntBASIC21.44■■□□□ 1.02
CLTAP09496 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLTAP09496 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLTAP09496 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
CLTAP09496 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLTAP09496 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLTAP09496 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLTAP09496 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CLTAP09496 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLTAP09496 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLTAP09496 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLTAP09496 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.44■■□□□ 1.02
CLTAP09496 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLTAP09496 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.43■■□□□ 1.02
CLTAP09496 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLTAP09496 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.43■■□□□ 1.02
CLTAP09496 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.43■■□□□ 1.02
CLTAP09496 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLTAP09496 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLTAP09496 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLTAP09496 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.43■■□□□ 1.02
CLTAP09496 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CLTAP09496 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLTAP09496 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLTAP09496 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLTAP09496 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.43■■□□□ 1.02
CLTAP09496 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.43■■□□□ 1.02
CLTAP09496 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.43■■□□□ 1.02
CLTAP09496 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLTAP09496 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.43■■□□□ 1.02
CLTAP09496 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLTAP09496 AP001271.2-201ENST00000624018 1556 ntBASIC21.43■■□□□ 1.02
CLTAP09496 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLTAP09496 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLTAP09496 AL691432.2-201ENST00000607222 2038 ntBASIC21.43■■□□□ 1.02
CLTAP09496 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLTAP09496 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLTAP09496 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLTAP09496 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLTAP09496 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLTAP09496 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms