Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.65■□□□□ 0.58
CTSBP07858 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSBP07858 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.65■□□□□ 0.58
CTSBP07858 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTSBP07858 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.65■□□□□ 0.58
CTSBP07858 NIFKP9-201ENST00000419265 221 ntBASIC18.65■□□□□ 0.58
CTSBP07858 TUBB8P6-201ENST00000436895 1288 ntBASIC18.65■□□□□ 0.58
CTSBP07858 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.65■□□□□ 0.58
CTSBP07858 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.65■□□□□ 0.58
CTSBP07858 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.65■□□□□ 0.58
CTSBP07858 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTSBP07858 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTSBP07858 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.65■□□□□ 0.58
CTSBP07858 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.65■□□□□ 0.58
CTSBP07858 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.65■□□□□ 0.58
CTSBP07858 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CTSBP07858 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
CTSBP07858 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSBP07858 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSBP07858 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSBP07858 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CTSBP07858 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTSBP07858 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSBP07858 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSBP07858 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CTSBP07858 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSBP07858 AL353807.1-201ENST00000427475 662 ntBASIC18.64■□□□□ 0.57
CTSBP07858 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.64■□□□□ 0.57
CTSBP07858 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSBP07858 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.64■□□□□ 0.57
CTSBP07858 AP003071.4-201ENST00000562276 1284 ntBASIC18.64■□□□□ 0.57
CTSBP07858 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.64■□□□□ 0.57
CTSBP07858 AL353708.3-201ENST00000610272 989 ntBASIC18.64■□□□□ 0.57
CTSBP07858 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.64■□□□□ 0.57
CTSBP07858 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSBP07858 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTSBP07858 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSBP07858 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSBP07858 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSBP07858 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CTSBP07858 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSBP07858 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSBP07858 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSBP07858 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSBP07858 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSBP07858 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CTSBP07858 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.63■□□□□ 0.57
CTSBP07858 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSBP07858 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.63■□□□□ 0.57
CTSBP07858 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSBP07858 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.63■□□□□ 0.57
CTSBP07858 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTSBP07858 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.63■□□□□ 0.57
CTSBP07858 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.63■□□□□ 0.57
CTSBP07858 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.63■□□□□ 0.57
CTSBP07858 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.63■□□□□ 0.57
CTSBP07858 MIR4785-201ENST00000585005 73 ntBASIC18.63■□□□□ 0.57
CTSBP07858 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSBP07858 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.63■□□□□ 0.57
CTSBP07858 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.63■□□□□ 0.57
CTSBP07858 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.63■□□□□ 0.57
CTSBP07858 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSBP07858 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CTSBP07858 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.63■□□□□ 0.57
CTSBP07858 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.63■□□□□ 0.57
CTSBP07858 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.63■□□□□ 0.57
CTSBP07858 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CTSBP07858 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSBP07858 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CTSBP07858 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSBP07858 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSBP07858 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.62■□□□□ 0.57
CTSBP07858 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSBP07858 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSBP07858 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.62■□□□□ 0.57
CTSBP07858 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSBP07858 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSBP07858 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CTSBP07858 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.62■□□□□ 0.57
CTSBP07858 BX088651.1-201ENST00000540551 451 ntBASIC18.62■□□□□ 0.57
CTSBP07858 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSBP07858 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSBP07858 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSBP07858 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSBP07858 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSBP07858 AC009237.14-201ENST00000609975 1594 ntBASIC18.62■□□□□ 0.57
CTSBP07858 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSBP07858 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.62■□□□□ 0.57
CTSBP07858 LINC01465-201ENST00000408887 1940 ntBASIC18.62■□□□□ 0.57
CTSBP07858 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSBP07858 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSBP07858 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSBP07858 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTSBP07858 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSBP07858 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.61■□□□□ 0.57
CTSBP07858 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTSBP07858 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CTSBP07858 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSBP07858 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSBP07858 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms