Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD3DP04234 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.65■□□□□ 0.26
CD3DP04234 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD3DP04234 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CD3DP04234 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD3DP04234 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD3DP04234 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
CD3DP04234 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CD3DP04234 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CD3DP04234 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CD3DP04234 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD3DP04234 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD3DP04234 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD3DP04234 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD3DP04234 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.64■□□□□ 0.25
CD3DP04234 KRT8P17-201ENST00000453110 1448 ntBASIC16.64■□□□□ 0.25
CD3DP04234 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD3DP04234 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD3DP04234 PTBP1P-201ENST00000554374 1601 ntBASIC16.64■□□□□ 0.25
CD3DP04234 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD3DP04234 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.64■□□□□ 0.25
CD3DP04234 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD3DP04234 AP001330.3-201ENST00000520123 633 ntBASIC16.64■□□□□ 0.25
CD3DP04234 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.64■□□□□ 0.25
CD3DP04234 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.64■□□□□ 0.25
CD3DP04234 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.64■□□□□ 0.25
CD3DP04234 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.64■□□□□ 0.25
CD3DP04234 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.64■□□□□ 0.25
CD3DP04234 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD3DP04234 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.64■□□□□ 0.25
CD3DP04234 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.64■□□□□ 0.25
CD3DP04234 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD3DP04234 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD3DP04234 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD3DP04234 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD3DP04234 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD3DP04234 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.64■□□□□ 0.25
CD3DP04234 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD3DP04234 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.64■□□□□ 0.25
CD3DP04234 RASA4CP-201ENST00000424092 1398 ntBASIC16.64■□□□□ 0.25
CD3DP04234 AC135050.7-201ENST00000624508 2218 ntBASIC16.64■□□□□ 0.25
CD3DP04234 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CD3DP04234 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD3DP04234 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CD3DP04234 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD3DP04234 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD3DP04234 AC006333.2-201ENST00000607957 2099 ntBASIC16.63■□□□□ 0.25
CD3DP04234 KRT16P6-202ENST00000425692 1426 ntBASIC16.63■□□□□ 0.25
CD3DP04234 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CD3DP04234 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.63■□□□□ 0.25
CD3DP04234 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD3DP04234 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD3DP04234 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CD3DP04234 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD3DP04234 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD3DP04234 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.63■□□□□ 0.25
CD3DP04234 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.63■□□□□ 0.25
CD3DP04234 AP001160.3-201ENST00000601484 763 ntBASIC16.63■□□□□ 0.25
CD3DP04234 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.63■□□□□ 0.25
CD3DP04234 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.63■□□□□ 0.25
CD3DP04234 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.63■□□□□ 0.25
CD3DP04234 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.63■□□□□ 0.25
CD3DP04234 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD3DP04234 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD3DP04234 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD3DP04234 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD3DP04234 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD3DP04234 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD3DP04234 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.62■□□□□ 0.25
CD3DP04234 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD3DP04234 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD3DP04234 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD3DP04234 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD3DP04234 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD3DP04234 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.62■□□□□ 0.25
CD3DP04234 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CD3DP04234 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.62■□□□□ 0.25
CD3DP04234 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.62■□□□□ 0.25
CD3DP04234 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD3DP04234 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.62■□□□□ 0.25
CD3DP04234 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.62■□□□□ 0.25
CD3DP04234 CCDC92B-201ENST00000575506 885 ntBASIC16.62■□□□□ 0.25
CD3DP04234 AC104187.1-201ENST00000607510 612 ntBASIC16.62■□□□□ 0.25
CD3DP04234 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
CD3DP04234 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.62■□□□□ 0.25
CD3DP04234 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD3DP04234 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD3DP04234 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD3DP04234 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD3DP04234 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.62■□□□□ 0.25
CD3DP04234 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD3DP04234 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.62■□□□□ 0.25
CD3DP04234 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD3DP04234 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD3DP04234 AC087633.2-202ENST00000565166 1439 ntBASIC16.62■□□□□ 0.25
CD3DP04234 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CD3DP04234 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD3DP04234 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD3DP04234 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD3DP04234 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms