Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
OPN1SWP03999 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
OPN1SWP03999 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.33■□□□□ 0.52
OPN1SWP03999 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
OPN1SWP03999 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
OPN1SWP03999 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.32■□□□□ 0.52
OPN1SWP03999 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 AC010980.2-201ENST00000587099 1412 ntBASIC18.32■□□□□ 0.52
OPN1SWP03999 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
OPN1SWP03999 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.32■□□□□ 0.52
OPN1SWP03999 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
OPN1SWP03999 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.32■□□□□ 0.52
OPN1SWP03999 AC007322.1-201ENST00000426983 750 ntBASIC18.32■□□□□ 0.52
OPN1SWP03999 AC093787.1-201ENST00000450396 207 ntBASIC18.32■□□□□ 0.52
OPN1SWP03999 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.32■□□□□ 0.52
OPN1SWP03999 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.32■□□□□ 0.52
OPN1SWP03999 AL589743.5-201ENST00000616611 1050 ntBASIC18.32■□□□□ 0.52
OPN1SWP03999 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.32■□□□□ 0.52
OPN1SWP03999 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
OPN1SWP03999 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
OPN1SWP03999 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.32■□□□□ 0.52
OPN1SWP03999 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
OPN1SWP03999 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
OPN1SWP03999 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
OPN1SWP03999 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
OPN1SWP03999 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
OPN1SWP03999 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
OPN1SWP03999 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
OPN1SWP03999 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
OPN1SWP03999 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.31■□□□□ 0.52
OPN1SWP03999 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
OPN1SWP03999 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
OPN1SWP03999 AC026271.2-201ENST00000428091 497 ntBASIC18.31■□□□□ 0.52
OPN1SWP03999 C2orf69P4-201ENST00000565394 541 ntBASIC18.31■□□□□ 0.52
OPN1SWP03999 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.31■□□□□ 0.52
OPN1SWP03999 AC231657.2-201ENST00000624556 255 ntBASIC18.31■□□□□ 0.52
OPN1SWP03999 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
OPN1SWP03999 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.31■□□□□ 0.52
OPN1SWP03999 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
OPN1SWP03999 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
OPN1SWP03999 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.3■□□□□ 0.52
OPN1SWP03999 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
OPN1SWP03999 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.3■□□□□ 0.52
OPN1SWP03999 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPN1SWP03999 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.3■□□□□ 0.52
OPN1SWP03999 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
OPN1SWP03999 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
OPN1SWP03999 AC093503.3-201ENST00000624917 2352 ntBASIC18.3■□□□□ 0.52
OPN1SWP03999 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPN1SWP03999 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPN1SWP03999 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPN1SWP03999 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPN1SWP03999 RARRES2P6-201ENST00000567333 442 ntBASIC18.3■□□□□ 0.52
OPN1SWP03999 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.3■□□□□ 0.52
OPN1SWP03999 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.3■□□□□ 0.52
OPN1SWP03999 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.3■□□□□ 0.52
OPN1SWP03999 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
OPN1SWP03999 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPN1SWP03999 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPN1SWP03999 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
OPN1SWP03999 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPN1SWP03999 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
OPN1SWP03999 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
OPN1SWP03999 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
OPN1SWP03999 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN1SWP03999 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN1SWP03999 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN1SWP03999 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN1SWP03999 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN1SWP03999 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
OPN1SWP03999 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN1SWP03999 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.29■□□□□ 0.52
OPN1SWP03999 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.29■□□□□ 0.52
OPN1SWP03999 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
OPN1SWP03999 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN1SWP03999 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
OPN1SWP03999 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN1SWP03999 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
OPN1SWP03999 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.29■□□□□ 0.52
OPN1SWP03999 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.29■□□□□ 0.52
OPN1SWP03999 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN1SWP03999 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.29■□□□□ 0.52
OPN1SWP03999 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.29■□□□□ 0.52
OPN1SWP03999 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms