Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
CHRNA1P02708 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHRNA1P02708 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.42■■□□□ 1.02
CHRNA1P02708 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHRNA1P02708 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHRNA1P02708 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CHRNA1P02708 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.42■■□□□ 1.02
CHRNA1P02708 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.42■■□□□ 1.02
CHRNA1P02708 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHRNA1P02708 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.42■■□□□ 1.02
CHRNA1P02708 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.42■■□□□ 1.02
CHRNA1P02708 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.42■■□□□ 1.02
CHRNA1P02708 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.42■■□□□ 1.02
CHRNA1P02708 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CHRNA1P02708 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
CHRNA1P02708 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHRNA1P02708 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHRNA1P02708 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHRNA1P02708 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.41■■□□□ 1.02
CHRNA1P02708 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CHRNA1P02708 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.41■■□□□ 1.02
CHRNA1P02708 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHRNA1P02708 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.41■■□□□ 1.02
CHRNA1P02708 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHRNA1P02708 KRT8P8-201ENST00000434750 1448 ntBASIC21.41■■□□□ 1.02
CHRNA1P02708 AC096733.2-201ENST00000609937 1394 ntBASIC21.41■■□□□ 1.02
CHRNA1P02708 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHRNA1P02708 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHRNA1P02708 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHRNA1P02708 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHRNA1P02708 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHRNA1P02708 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.41■■□□□ 1.02
CHRNA1P02708 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHRNA1P02708 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CHRNA1P02708 ATP5G1P1-201ENST00000448724 379 ntBASIC21.41■■□□□ 1.02
CHRNA1P02708 AC091390.4-202ENST00000476426 537 ntBASIC21.41■■□□□ 1.02
CHRNA1P02708 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.41■■□□□ 1.02
CHRNA1P02708 AC128688.1-201ENST00000487626 519 ntBASIC21.41■■□□□ 1.02
CHRNA1P02708 Z85996.1-201ENST00000494644 937 ntBASIC21.41■■□□□ 1.02
CHRNA1P02708 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.41■■□□□ 1.02
CHRNA1P02708 WWOX-216ENST00000569818 525 ntBASIC21.41■■□□□ 1.02
CHRNA1P02708 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHRNA1P02708 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHRNA1P02708 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHRNA1P02708 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.41■■□□□ 1.02
CHRNA1P02708 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRNA1P02708 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.4■■□□□ 1.02
CHRNA1P02708 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.4■■□□□ 1.02
CHRNA1P02708 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRNA1P02708 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.4■■□□□ 1.02
CHRNA1P02708 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHRNA1P02708 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRNA1P02708 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHRNA1P02708 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRNA1P02708 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.4■■□□□ 1.02
CHRNA1P02708 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.4■■□□□ 1.02
CHRNA1P02708 MFAP1P1-201ENST00000442257 1255 ntBASIC21.4■■□□□ 1.02
CHRNA1P02708 FAM207BP-201ENST00000447172 505 ntBASIC21.4■■□□□ 1.02
CHRNA1P02708 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.4■■□□□ 1.02
CHRNA1P02708 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHRNA1P02708 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.4■■□□□ 1.02
CHRNA1P02708 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRNA1P02708 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRNA1P02708 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRNA1P02708 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRNA1P02708 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHRNA1P02708 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.39■■□□□ 1.02
CHRNA1P02708 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHRNA1P02708 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHRNA1P02708 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CHRNA1P02708 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CHRNA1P02708 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHRNA1P02708 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHRNA1P02708 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
CHRNA1P02708 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
CHRNA1P02708 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CHRNA1P02708 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
CHRNA1P02708 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.39■■□□□ 1.01
CHRNA1P02708 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.39■■□□□ 1.01
CHRNA1P02708 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHRNA1P02708 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
CHRNA1P02708 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHRNA1P02708 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
CHRNA1P02708 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CHRNA1P02708 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHRNA1P02708 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
CHRNA1P02708 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHRNA1P02708 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.38■■□□□ 1.01
CHRNA1P02708 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CHRNA1P02708 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHRNA1P02708 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHRNA1P02708 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHRNA1P02708 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHRNA1P02708 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.38■■□□□ 1.01
CHRNA1P02708 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.38■■□□□ 1.01
CHRNA1P02708 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms