Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 YBX1P10-201ENST00000444752 975 ntBASIC21.14■□□□□ 0.97
HLA-DRAP01903 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HLA-DRAP01903 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.14■□□□□ 0.97
HLA-DRAP01903 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.14■□□□□ 0.97
HLA-DRAP01903 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-DRAP01903 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.14■□□□□ 0.97
HLA-DRAP01903 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-DRAP01903 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
HLA-DRAP01903 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.14■□□□□ 0.97
HLA-DRAP01903 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.14■□□□□ 0.97
HLA-DRAP01903 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DRAP01903 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DRAP01903 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DRAP01903 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HLA-DRAP01903 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.13■□□□□ 0.97
HLA-DRAP01903 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DRAP01903 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DRAP01903 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DRAP01903 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DRAP01903 ABHD17AP1-201ENST00000358206 933 ntBASIC21.13■□□□□ 0.97
HLA-DRAP01903 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.13■□□□□ 0.97
HLA-DRAP01903 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DRAP01903 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.13■□□□□ 0.97
HLA-DRAP01903 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.13■□□□□ 0.97
HLA-DRAP01903 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DRAP01903 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DRAP01903 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.13■□□□□ 0.97
HLA-DRAP01903 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.13■□□□□ 0.97
HLA-DRAP01903 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.13■□□□□ 0.97
HLA-DRAP01903 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DRAP01903 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DRAP01903 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DRAP01903 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DRAP01903 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
HLA-DRAP01903 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DRAP01903 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DRAP01903 KRT18P29-201ENST00000397031 1267 ntBASIC21.12■□□□□ 0.97
HLA-DRAP01903 KRASP1-201ENST00000407852 552 ntBASIC21.12■□□□□ 0.97
HLA-DRAP01903 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.12■□□□□ 0.97
HLA-DRAP01903 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DRAP01903 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.12■□□□□ 0.97
HLA-DRAP01903 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.12■□□□□ 0.97
HLA-DRAP01903 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.12■□□□□ 0.97
HLA-DRAP01903 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.12■□□□□ 0.97
HLA-DRAP01903 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
HLA-DRAP01903 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DRAP01903 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
HLA-DRAP01903 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DRAP01903 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HLA-DRAP01903 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DRAP01903 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DRAP01903 NBPF21P-201ENST00000425093 1451 ntBASIC21.12■□□□□ 0.97
HLA-DRAP01903 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.12■□□□□ 0.97
HLA-DRAP01903 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DRAP01903 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.12■□□□□ 0.97
HLA-DRAP01903 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DRAP01903 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DRAP01903 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DRAP01903 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
HLA-DRAP01903 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DRAP01903 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.11■□□□□ 0.97
HLA-DRAP01903 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DRAP01903 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
HLA-DRAP01903 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
HLA-DRAP01903 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
HLA-DRAP01903 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.11■□□□□ 0.97
HLA-DRAP01903 AC239809.2-201ENST00000415381 517 ntBASIC21.11■□□□□ 0.97
HLA-DRAP01903 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
HLA-DRAP01903 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.11■□□□□ 0.97
HLA-DRAP01903 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DRAP01903 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
HLA-DRAP01903 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DRAP01903 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HLA-DRAP01903 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DRAP01903 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HLA-DRAP01903 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DRAP01903 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.1■□□□□ 0.97
HLA-DRAP01903 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HLA-DRAP01903 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DRAP01903 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
HLA-DRAP01903 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.1■□□□□ 0.97
HLA-DRAP01903 PRORSD1P-201ENST00000295112 541 ntBASIC21.1■□□□□ 0.97
HLA-DRAP01903 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DRAP01903 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HLA-DRAP01903 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HLA-DRAP01903 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HLA-DRAP01903 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.1■□□□□ 0.97
HLA-DRAP01903 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.1■□□□□ 0.97
HLA-DRAP01903 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.1■□□□□ 0.97
HLA-DRAP01903 AC124016.1-201ENST00000609552 612 ntBASIC21.1■□□□□ 0.97
HLA-DRAP01903 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
HLA-DRAP01903 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DRAP01903 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DRAP01903 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DRAP01903 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.1■□□□□ 0.97
HLA-DRAP01903 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.1■□□□□ 0.97
HLA-DRAP01903 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HLA-DRAP01903 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HLA-DRAP01903 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HLA-DRAP01903 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms