Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV12-3P01733 AP006587.1-201ENST00000534129 1502 ntBASIC15.18■□□□□ 0.02
TRBV12-3P01733 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRBV12-3P01733 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV12-3P01733 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV12-3P01733 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV12-3P01733 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV12-3P01733 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.18■□□□□ 0.02
TRBV12-3P01733 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV12-3P01733 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
TRBV12-3P01733 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.18■□□□□ 0.02
TRBV12-3P01733 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.18■□□□□ 0.02
TRBV12-3P01733 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
TRBV12-3P01733 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.18■□□□□ 0.02
TRBV12-3P01733 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV12-3P01733 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV12-3P01733 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV12-3P01733 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV12-3P01733 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRBV12-3P01733 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRBV12-3P01733 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV12-3P01733 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 AC124016.1-201ENST00000609552 612 ntBASIC15.17■□□□□ 0.02
TRBV12-3P01733 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 AL158211.5-201ENST00000623583 2518 ntBASIC15.17■□□□□ 0.02
TRBV12-3P01733 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.17■□□□□ 0.02
TRBV12-3P01733 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV12-3P01733 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV12-3P01733 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRBV12-3P01733 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV12-3P01733 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV12-3P01733 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV12-3P01733 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV12-3P01733 NBPF21P-201ENST00000425093 1451 ntBASIC15.16■□□□□ 0.02
TRBV12-3P01733 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRBV12-3P01733 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV12-3P01733 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV12-3P01733 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV12-3P01733 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV12-3P01733 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRBV12-3P01733 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRBV12-3P01733 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV12-3P01733 RPPH1-201ENST00000516869 333 ntBASIC15.16■□□□□ 0.02
TRBV12-3P01733 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.16■□□□□ 0.02
TRBV12-3P01733 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV12-3P01733 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBV12-3P01733 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBV12-3P01733 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRBV12-3P01733 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV12-3P01733 TMEM191A-211ENST00000637163 1067 ntBASIC15.16■□□□□ 0.02
TRBV12-3P01733 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV12-3P01733 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV12-3P01733 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV12-3P01733 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV12-3P01733 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV12-3P01733 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV12-3P01733 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.16■□□□□ 0.02
TRBV12-3P01733 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV12-3P01733 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV12-3P01733 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV12-3P01733 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV12-3P01733 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
TRBV12-3P01733 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV12-3P01733 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.15■□□□□ 0.02
TRBV12-3P01733 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms