Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
ALX3O95076 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALX3O95076 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ALX3O95076 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.31■□□□□ 0.36
ALX3O95076 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALX3O95076 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALX3O95076 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ALX3O95076 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.31■□□□□ 0.36
ALX3O95076 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ALX3O95076 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ALX3O95076 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.31■□□□□ 0.36
ALX3O95076 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALX3O95076 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALX3O95076 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALX3O95076 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALX3O95076 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALX3O95076 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.3■□□□□ 0.36
ALX3O95076 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALX3O95076 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALX3O95076 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.3■□□□□ 0.36
ALX3O95076 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
ALX3O95076 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.3■□□□□ 0.36
ALX3O95076 AC011270.2-201ENST00000624293 2550 ntBASIC17.3■□□□□ 0.36
ALX3O95076 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALX3O95076 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALX3O95076 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.3■□□□□ 0.36
ALX3O95076 AC007322.4-201ENST00000509611 723 ntBASIC17.3■□□□□ 0.36
ALX3O95076 KRT18P61-201ENST00000585825 1298 ntBASIC17.3■□□□□ 0.36
ALX3O95076 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.3■□□□□ 0.36
ALX3O95076 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALX3O95076 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ALX3O95076 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ALX3O95076 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ALX3O95076 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.29■□□□□ 0.36
ALX3O95076 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALX3O95076 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALX3O95076 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ALX3O95076 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALX3O95076 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ALX3O95076 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALX3O95076 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALX3O95076 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALX3O95076 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALX3O95076 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
ALX3O95076 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.29■□□□□ 0.36
ALX3O95076 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALX3O95076 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.29■□□□□ 0.36
ALX3O95076 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.29■□□□□ 0.36
ALX3O95076 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.29■□□□□ 0.36
ALX3O95076 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALX3O95076 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALX3O95076 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALX3O95076 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALX3O95076 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALX3O95076 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ALX3O95076 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALX3O95076 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ALX3O95076 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
ALX3O95076 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ALX3O95076 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.28■□□□□ 0.36
ALX3O95076 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ALX3O95076 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ALX3O95076 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.28■□□□□ 0.36
ALX3O95076 AC005332.7-201ENST00000614046 2005 ntBASIC17.28■□□□□ 0.36
ALX3O95076 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ALX3O95076 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX3O95076 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX3O95076 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX3O95076 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.28■□□□□ 0.36
ALX3O95076 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX3O95076 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALX3O95076 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.28■□□□□ 0.36
ALX3O95076 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ALX3O95076 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.28■□□□□ 0.36
ALX3O95076 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.28■□□□□ 0.36
ALX3O95076 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX3O95076 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.28■□□□□ 0.36
ALX3O95076 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.28■□□□□ 0.36
ALX3O95076 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.28■□□□□ 0.36
ALX3O95076 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.28■□□□□ 0.36
ALX3O95076 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.28■□□□□ 0.36
ALX3O95076 AC018470.1-201ENST00000624790 3129 ntBASIC17.28■□□□□ 0.36
ALX3O95076 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX3O95076 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ALX3O95076 AL691432.2-201ENST00000607222 2038 ntBASIC17.28■□□□□ 0.36
ALX3O95076 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX3O95076 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALX3O95076 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ALX3O95076 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ALX3O95076 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
ALX3O95076 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALX3O95076 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.27■□□□□ 0.36
ALX3O95076 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.27■□□□□ 0.36
ALX3O95076 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.27■□□□□ 0.36
ALX3O95076 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALX3O95076 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALX3O95076 CYP21A1P-202ENST00000354927 1481 ntBASIC17.27■□□□□ 0.36
ALX3O95076 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
ALX3O95076 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.27■□□□□ 0.36
ALX3O95076 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms