Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
LTN1O94822 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
LTN1O94822 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LTN1O94822 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC26.16■■□□□ 1.78
LTN1O94822 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC26.16■■□□□ 1.78
LTN1O94822 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC26.16■■□□□ 1.78
LTN1O94822 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LTN1O94822 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LTN1O94822 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.15■■□□□ 1.78
LTN1O94822 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC26.15■■□□□ 1.78
LTN1O94822 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC26.15■■□□□ 1.78
LTN1O94822 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LTN1O94822 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC26.15■■□□□ 1.78
LTN1O94822 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC26.15■■□□□ 1.78
LTN1O94822 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LTN1O94822 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
LTN1O94822 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
LTN1O94822 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC26.15■■□□□ 1.78
LTN1O94822 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC26.15■■□□□ 1.78
LTN1O94822 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
LTN1O94822 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC26.15■■□□□ 1.78
LTN1O94822 USF2-205ENST00000594064 1179 ntTSL 2 BASIC26.15■■□□□ 1.78
LTN1O94822 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
LTN1O94822 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
LTN1O94822 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC26.14■■□□□ 1.78
LTN1O94822 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
LTN1O94822 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
LTN1O94822 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC26.14■■□□□ 1.78
LTN1O94822 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
LTN1O94822 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC26.14■■□□□ 1.78
LTN1O94822 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
LTN1O94822 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LTN1O94822 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LTN1O94822 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LTN1O94822 AL031133.1-201ENST00000406807 723 ntBASIC26.13■■□□□ 1.77
LTN1O94822 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LTN1O94822 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LTN1O94822 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LTN1O94822 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC26.13■■□□□ 1.77
LTN1O94822 LINC01238-205ENST00000567549 1107 ntBASIC26.13■■□□□ 1.77
LTN1O94822 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC26.13■■□□□ 1.77
LTN1O94822 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LTN1O94822 AL358472.4-201ENST00000633140 710 ntBASIC26.12■■□□□ 1.77
LTN1O94822 KRT8P41-201ENST00000533985 1514 ntBASIC26.12■■□□□ 1.77
LTN1O94822 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
LTN1O94822 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
LTN1O94822 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
LTN1O94822 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
LTN1O94822 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC26.12■■□□□ 1.77
LTN1O94822 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
LTN1O94822 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
LTN1O94822 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
LTN1O94822 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
LTN1O94822 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
LTN1O94822 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
LTN1O94822 NMU-205ENST00000511469 756 ntTSL 3 BASIC26.12■■□□□ 1.77
LTN1O94822 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC26.12■■□□□ 1.77
LTN1O94822 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC26.12■■□□□ 1.77
LTN1O94822 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC26.12■■□□□ 1.77
LTN1O94822 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
LTN1O94822 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
LTN1O94822 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC26.11■■□□□ 1.77
LTN1O94822 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
LTN1O94822 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
LTN1O94822 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
LTN1O94822 CD70-202ENST00000423145 881 ntTSL 2 BASIC26.11■■□□□ 1.77
LTN1O94822 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC26.11■■□□□ 1.77
LTN1O94822 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC26.11■■□□□ 1.77
LTN1O94822 AL160286.2-201ENST00000567150 934 ntBASIC26.11■■□□□ 1.77
LTN1O94822 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC26.11■■□□□ 1.77
LTN1O94822 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
LTN1O94822 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
LTN1O94822 LINC01465-201ENST00000408887 1940 ntBASIC26.11■■□□□ 1.77
LTN1O94822 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
LTN1O94822 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
LTN1O94822 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC26.11■■□□□ 1.77
LTN1O94822 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
LTN1O94822 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
LTN1O94822 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LTN1O94822 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LTN1O94822 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
LTN1O94822 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LTN1O94822 AP003041.3-201ENST00000527151 707 ntBASIC26.1■■□□□ 1.77
LTN1O94822 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC26.1■■□□□ 1.77
LTN1O94822 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
LTN1O94822 AC141257.4-201ENST00000634557 245 ntBASIC26.1■■□□□ 1.77
LTN1O94822 AC136944.6-201ENST00000634818 245 ntBASIC26.1■■□□□ 1.77
LTN1O94822 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
LTN1O94822 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC26.1■■□□□ 1.77
LTN1O94822 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC26.1■■□□□ 1.77
LTN1O94822 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
LTN1O94822 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LTN1O94822 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC26.1■■□□□ 1.77
LTN1O94822 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC26.1■■□□□ 1.77
LTN1O94822 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
LTN1O94822 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
LTN1O94822 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LTN1O94822 UPK3BP1-201ENST00000428678 509 ntBASIC26.1■■□□□ 1.77
LTN1O94822 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LTN1O94822 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms