Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 BICD1-207ENST00000551848 1962 ntBASIC17.78■□□□□ 0.44
CLPXO76031 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.78■□□□□ 0.44
CLPXO76031 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLPXO76031 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPXO76031 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.78■□□□□ 0.44
CLPXO76031 AC055733.4-201ENST00000638462 1354 ntBASIC17.78■□□□□ 0.44
CLPXO76031 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLPXO76031 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLPXO76031 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.77■□□□□ 0.44
CLPXO76031 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLPXO76031 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
CLPXO76031 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLPXO76031 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLPXO76031 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.77■□□□□ 0.44
CLPXO76031 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLPXO76031 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLPXO76031 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLPXO76031 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CLPXO76031 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLPXO76031 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLPXO76031 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLPXO76031 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.77■□□□□ 0.44
CLPXO76031 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.77■□□□□ 0.44
CLPXO76031 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLPXO76031 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.77■□□□□ 0.44
CLPXO76031 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLPXO76031 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLPXO76031 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLPXO76031 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLPXO76031 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.77■□□□□ 0.43
CLPXO76031 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.77■□□□□ 0.43
CLPXO76031 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLPXO76031 AC139713.2-201ENST00000641328 2723 ntBASIC17.77■□□□□ 0.43
CLPXO76031 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLPXO76031 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPXO76031 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLPXO76031 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CLPXO76031 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CLPXO76031 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLPXO76031 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.76■□□□□ 0.43
CLPXO76031 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.76■□□□□ 0.43
CLPXO76031 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPXO76031 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.76■□□□□ 0.43
CLPXO76031 BX119927.1-201ENST00000636596 1552 ntBASIC17.76■□□□□ 0.43
CLPXO76031 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPXO76031 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLPXO76031 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.76■□□□□ 0.43
CLPXO76031 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPXO76031 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPXO76031 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLPXO76031 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLPXO76031 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLPXO76031 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPXO76031 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CLPXO76031 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.75■□□□□ 0.43
CLPXO76031 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.75■□□□□ 0.43
CLPXO76031 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.75■□□□□ 0.43
CLPXO76031 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPXO76031 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLPXO76031 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPXO76031 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.75■□□□□ 0.43
CLPXO76031 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPXO76031 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPXO76031 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPXO76031 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLPXO76031 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPXO76031 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLPXO76031 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.75■□□□□ 0.43
CLPXO76031 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.75■□□□□ 0.43
CLPXO76031 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CLPXO76031 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.75■□□□□ 0.43
CLPXO76031 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLPXO76031 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLPXO76031 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.75■□□□□ 0.43
CLPXO76031 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPXO76031 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPXO76031 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.75■□□□□ 0.43
CLPXO76031 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPXO76031 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPXO76031 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLPXO76031 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.75■□□□□ 0.43
CLPXO76031 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.75■□□□□ 0.43
CLPXO76031 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.75■□□□□ 0.43
CLPXO76031 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPXO76031 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.74■□□□□ 0.43
CLPXO76031 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPXO76031 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.74■□□□□ 0.43
CLPXO76031 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLPXO76031 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.74■□□□□ 0.43
CLPXO76031 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPXO76031 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLPXO76031 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLPXO76031 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLPXO76031 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.74■□□□□ 0.43
CLPXO76031 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPXO76031 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.74■□□□□ 0.43
CLPXO76031 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.74■□□□□ 0.43
CLPXO76031 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPXO76031 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPXO76031 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms