Protein–RNA interactions for Protein: O75962

TRIO, Triple functional domain protein, humanhuman

Predictions only

Length 3,097 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOO75962 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIOO75962 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIOO75962 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRIOO75962 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIOO75962 AC004951.3-201ENST00000418645 1148 ntBASIC20.08■□□□□ 0.81
TRIOO75962 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.08■□□□□ 0.81
TRIOO75962 EMBP1-201ENST00000458200 901 ntBASIC20.08■□□□□ 0.81
TRIOO75962 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.08■□□□□ 0.81
TRIOO75962 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.08■□□□□ 0.81
TRIOO75962 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
TRIOO75962 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIOO75962 Z85996.1-201ENST00000494644 937 ntBASIC20.08■□□□□ 0.81
TRIOO75962 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIOO75962 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIOO75962 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.08■□□□□ 0.8
TRIOO75962 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.08■□□□□ 0.8
TRIOO75962 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRIOO75962 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRIOO75962 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIOO75962 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIOO75962 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.08■□□□□ 0.8
TRIOO75962 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.08■□□□□ 0.8
TRIOO75962 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.08■□□□□ 0.8
TRIOO75962 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
TRIOO75962 EP400NL-214ENST00000641289 2402 ntBASIC20.07■□□□□ 0.8
TRIOO75962 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIOO75962 MIR3652-201ENST00000579335 131 ntBASIC20.07■□□□□ 0.8
TRIOO75962 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
TRIOO75962 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
TRIOO75962 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIOO75962 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIOO75962 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIOO75962 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TRIOO75962 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIOO75962 ATP5G2P1-201ENST00000433580 426 ntBASIC20.07■□□□□ 0.8
TRIOO75962 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.07■□□□□ 0.8
TRIOO75962 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIOO75962 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TRIOO75962 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIOO75962 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIOO75962 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TRIOO75962 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIOO75962 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIOO75962 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIOO75962 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIOO75962 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIOO75962 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIOO75962 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIOO75962 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIOO75962 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIOO75962 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIOO75962 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
TRIOO75962 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIOO75962 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
TRIOO75962 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIOO75962 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIOO75962 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIOO75962 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIOO75962 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIOO75962 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIOO75962 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIOO75962 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIOO75962 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIOO75962 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIOO75962 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIOO75962 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIOO75962 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIOO75962 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIOO75962 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIOO75962 AC018553.1-201ENST00000616682 1458 ntBASIC20.05■□□□□ 0.8
TRIOO75962 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIOO75962 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIOO75962 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIOO75962 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIOO75962 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIOO75962 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
TRIOO75962 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRIOO75962 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
TRIOO75962 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIOO75962 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.05■□□□□ 0.8
TRIOO75962 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.05■□□□□ 0.8
TRIOO75962 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
TRIOO75962 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIOO75962 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIOO75962 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIOO75962 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRIOO75962 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIOO75962 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIOO75962 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIOO75962 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIOO75962 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIOO75962 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TRIOO75962 AL023973.1-201ENST00000624619 620 ntBASIC20.04■□□□□ 0.8
TRIOO75962 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIOO75962 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIOO75962 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIOO75962 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIOO75962 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIOO75962 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIOO75962 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms