Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LCMT2O60294 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.8■□□□□ 0.6
LCMT2O60294 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.8■□□□□ 0.6
LCMT2O60294 C1QBPP2-201ENST00000528754 825 ntBASIC18.8■□□□□ 0.6
LCMT2O60294 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.8■□□□□ 0.6
LCMT2O60294 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.8■□□□□ 0.6
LCMT2O60294 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LCMT2O60294 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.8■□□□□ 0.6
LCMT2O60294 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LCMT2O60294 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LCMT2O60294 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.8■□□□□ 0.6
LCMT2O60294 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LCMT2O60294 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
LCMT2O60294 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LCMT2O60294 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LCMT2O60294 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LCMT2O60294 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LCMT2O60294 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LCMT2O60294 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.79■□□□□ 0.6
LCMT2O60294 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LCMT2O60294 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
LCMT2O60294 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.79■□□□□ 0.6
LCMT2O60294 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LCMT2O60294 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.79■□□□□ 0.6
LCMT2O60294 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LCMT2O60294 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
LCMT2O60294 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LCMT2O60294 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.79■□□□□ 0.6
LCMT2O60294 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.79■□□□□ 0.6
LCMT2O60294 KRASP1-201ENST00000407852 552 ntBASIC18.79■□□□□ 0.6
LCMT2O60294 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.79■□□□□ 0.6
LCMT2O60294 RPPH1-201ENST00000516869 333 ntBASIC18.79■□□□□ 0.6
LCMT2O60294 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.79■□□□□ 0.6
LCMT2O60294 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.79■□□□□ 0.6
LCMT2O60294 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.79■□□□□ 0.6
LCMT2O60294 AC124016.1-201ENST00000609552 612 ntBASIC18.79■□□□□ 0.6
LCMT2O60294 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LCMT2O60294 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
LCMT2O60294 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LCMT2O60294 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCMT2O60294 NBPF21P-201ENST00000425093 1451 ntBASIC18.78■□□□□ 0.6
LCMT2O60294 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.78■□□□□ 0.6
LCMT2O60294 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LCMT2O60294 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LCMT2O60294 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCMT2O60294 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCMT2O60294 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.78■□□□□ 0.6
LCMT2O60294 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.78■□□□□ 0.6
LCMT2O60294 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LCMT2O60294 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.78■□□□□ 0.6
LCMT2O60294 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.78■□□□□ 0.6
LCMT2O60294 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.78■□□□□ 0.6
LCMT2O60294 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
LCMT2O60294 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.78■□□□□ 0.6
LCMT2O60294 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LCMT2O60294 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LCMT2O60294 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.78■□□□□ 0.6
LCMT2O60294 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCMT2O60294 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCMT2O60294 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LCMT2O60294 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.78■□□□□ 0.6
LCMT2O60294 TREX1-205ENST00000625293 1783 ntBASIC18.78■□□□□ 0.6
LCMT2O60294 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LCMT2O60294 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCMT2O60294 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCMT2O60294 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCMT2O60294 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.77■□□□□ 0.6
LCMT2O60294 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
LCMT2O60294 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCMT2O60294 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCMT2O60294 AC239809.2-201ENST00000415381 517 ntBASIC18.77■□□□□ 0.6
LCMT2O60294 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LCMT2O60294 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LCMT2O60294 AC098590.1-201ENST00000468126 897 ntBASIC18.77■□□□□ 0.6
LCMT2O60294 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
LCMT2O60294 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LCMT2O60294 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.77■□□□□ 0.6
LCMT2O60294 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.77■□□□□ 0.6
LCMT2O60294 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LCMT2O60294 TMEM191A-211ENST00000637163 1067 ntBASIC18.77■□□□□ 0.6
LCMT2O60294 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCMT2O60294 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
LCMT2O60294 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCMT2O60294 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCMT2O60294 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LCMT2O60294 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCMT2O60294 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCMT2O60294 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCMT2O60294 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.77■□□□□ 0.6
LCMT2O60294 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.77■□□□□ 0.59
LCMT2O60294 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
LCMT2O60294 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LCMT2O60294 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.76■□□□□ 0.59
LCMT2O60294 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LCMT2O60294 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LCMT2O60294 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LCMT2O60294 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.76■□□□□ 0.59
LCMT2O60294 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LCMT2O60294 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LCMT2O60294 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms