Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNAI2O43623 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNAI2O43623 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SNAI2O43623 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNAI2O43623 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SNAI2O43623 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.65□□□□□ -0.06
SNAI2O43623 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.07
SNAI2O43623 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.64□□□□□ -0.07
SNAI2O43623 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.64□□□□□ -0.07
SNAI2O43623 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.64□□□□□ -0.07
SNAI2O43623 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
SNAI2O43623 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SNAI2O43623 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.64□□□□□ -0.07
SNAI2O43623 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.64□□□□□ -0.07
SNAI2O43623 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.64□□□□□ -0.07
SNAI2O43623 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.64□□□□□ -0.07
SNAI2O43623 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
SNAI2O43623 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.64□□□□□ -0.07
SNAI2O43623 KRT18P20-201ENST00000548986 1279 ntBASIC14.64□□□□□ -0.07
SNAI2O43623 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.64□□□□□ -0.07
SNAI2O43623 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.64□□□□□ -0.07
SNAI2O43623 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SNAI2O43623 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.64□□□□□ -0.07
SNAI2O43623 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.64□□□□□ -0.07
SNAI2O43623 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.64□□□□□ -0.07
SNAI2O43623 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SNAI2O43623 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.64□□□□□ -0.07
SNAI2O43623 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SNAI2O43623 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.64□□□□□ -0.07
SNAI2O43623 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNAI2O43623 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.63□□□□□ -0.07
SNAI2O43623 AC093503.3-201ENST00000624917 2352 ntBASIC14.63□□□□□ -0.07
SNAI2O43623 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.63□□□□□ -0.07
SNAI2O43623 AL049812.1-201ENST00000432563 2267 ntBASIC14.63□□□□□ -0.07
SNAI2O43623 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.63□□□□□ -0.07
SNAI2O43623 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.63□□□□□ -0.07
SNAI2O43623 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.63□□□□□ -0.07
SNAI2O43623 AL136967.2-201ENST00000623968 743 ntBASIC14.63□□□□□ -0.07
SNAI2O43623 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
SNAI2O43623 AC012313.1-201ENST00000593393 3059 ntBASIC14.63□□□□□ -0.07
SNAI2O43623 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.63□□□□□ -0.07
SNAI2O43623 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SNAI2O43623 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.63□□□□□ -0.07
SNAI2O43623 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.63□□□□□ -0.07
SNAI2O43623 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SNAI2O43623 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNAI2O43623 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNAI2O43623 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNAI2O43623 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNAI2O43623 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.62□□□□□ -0.07
SNAI2O43623 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNAI2O43623 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNAI2O43623 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNAI2O43623 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
SNAI2O43623 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNAI2O43623 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNAI2O43623 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNAI2O43623 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SNAI2O43623 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.62□□□□□ -0.07
SNAI2O43623 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNAI2O43623 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.62□□□□□ -0.07
SNAI2O43623 AC105265.2-201ENST00000467189 838 ntBASIC14.62□□□□□ -0.07
SNAI2O43623 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.62□□□□□ -0.07
SNAI2O43623 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.62□□□□□ -0.07
SNAI2O43623 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.62□□□□□ -0.07
SNAI2O43623 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms