Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RNF113AO15541 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.61■■□□□ 1.37
RNF113AO15541 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RNF113AO15541 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
RNF113AO15541 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RNF113AO15541 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.61■■□□□ 1.37
RNF113AO15541 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF113AO15541 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RNF113AO15541 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.61■■□□□ 1.37
RNF113AO15541 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF113AO15541 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF113AO15541 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF113AO15541 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF113AO15541 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF113AO15541 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF113AO15541 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.6■■□□□ 1.37
RNF113AO15541 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF113AO15541 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF113AO15541 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
RNF113AO15541 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF113AO15541 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.6■■□□□ 1.37
RNF113AO15541 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF113AO15541 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF113AO15541 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF113AO15541 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF113AO15541 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
RNF113AO15541 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF113AO15541 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF113AO15541 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF113AO15541 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF113AO15541 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF113AO15541 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF113AO15541 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
RNF113AO15541 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
RNF113AO15541 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF113AO15541 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.59■■□□□ 1.37
RNF113AO15541 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF113AO15541 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF113AO15541 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.59■■□□□ 1.37
RNF113AO15541 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RNF113AO15541 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF113AO15541 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.59■■□□□ 1.37
RNF113AO15541 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.59■■□□□ 1.37
RNF113AO15541 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF113AO15541 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF113AO15541 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.59■■□□□ 1.37
RNF113AO15541 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF113AO15541 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF113AO15541 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.59■■□□□ 1.37
RNF113AO15541 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF113AO15541 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF113AO15541 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF113AO15541 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23.59■■□□□ 1.37
RNF113AO15541 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF113AO15541 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF113AO15541 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RNF113AO15541 AFG3L1P-217ENST00000557444 2447 ntBASIC23.58■■□□□ 1.37
RNF113AO15541 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF113AO15541 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF113AO15541 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
RNF113AO15541 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
RNF113AO15541 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.58■■□□□ 1.37
RNF113AO15541 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF113AO15541 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF113AO15541 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.58■■□□□ 1.37
RNF113AO15541 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.58■■□□□ 1.37
RNF113AO15541 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RNF113AO15541 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF113AO15541 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF113AO15541 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.58■■□□□ 1.37
RNF113AO15541 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RNF113AO15541 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RNF113AO15541 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
RNF113AO15541 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF113AO15541 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF113AO15541 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF113AO15541 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF113AO15541 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF113AO15541 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.57■■□□□ 1.36
RNF113AO15541 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
RNF113AO15541 RARRES2P10-201ENST00000564312 460 ntBASIC23.57■■□□□ 1.36
RNF113AO15541 C1QL1P1-201ENST00000568105 661 ntBASIC23.57■■□□□ 1.36
RNF113AO15541 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF113AO15541 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF113AO15541 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.57■■□□□ 1.36
RNF113AO15541 KRT8P8-201ENST00000434750 1448 ntBASIC23.57■■□□□ 1.36
RNF113AO15541 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF113AO15541 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF113AO15541 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
RNF113AO15541 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF113AO15541 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF113AO15541 HTR7P1-201ENST00000538670 1336 ntBASIC23.57■■□□□ 1.36
RNF113AO15541 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF113AO15541 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF113AO15541 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF113AO15541 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF113AO15541 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF113AO15541 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.56■■□□□ 1.36
RNF113AO15541 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF113AO15541 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms