Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CHD1O14646 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CHD1O14646 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CHD1O14646 PHB2-202ENST00000440277 996 ntTSL 5 BASIC32.01■■■□□ 2.72
CHD1O14646 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC32.01■■■□□ 2.72
CHD1O14646 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.72
CHD1O14646 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC32.01■■■□□ 2.72
CHD1O14646 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC32.01■■■□□ 2.72
CHD1O14646 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC32.01■■■□□ 2.71
CHD1O14646 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CHD1O14646 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CHD1O14646 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC32■■■□□ 2.71
CHD1O14646 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
CHD1O14646 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CHD1O14646 TSSC2-201ENST00000450217 709 ntBASIC32■■■□□ 2.71
CHD1O14646 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC32■■■□□ 2.71
CHD1O14646 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC32■■■□□ 2.71
CHD1O14646 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC32■■■□□ 2.71
CHD1O14646 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CHD1O14646 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CHD1O14646 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC31.99■■■□□ 2.71
CHD1O14646 TBCB-205ENST00000585746 875 ntTSL 3 BASIC31.99■■■□□ 2.71
CHD1O14646 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CHD1O14646 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CHD1O14646 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CHD1O14646 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
CHD1O14646 TSPY19P-201ENST00000418461 509 ntBASIC31.98■■■□□ 2.71
CHD1O14646 TSPY18P-201ENST00000441642 509 ntBASIC31.98■■■□□ 2.71
CHD1O14646 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
CHD1O14646 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CHD1O14646 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CHD1O14646 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC31.98■■■□□ 2.71
CHD1O14646 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC31.98■■■□□ 2.71
CHD1O14646 ILF2-202ENST00000368681 726 ntTSL 2 BASIC31.97■■■□□ 2.71
CHD1O14646 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC31.97■■■□□ 2.71
CHD1O14646 TPSP2-201ENST00000561760 610 ntBASIC31.97■■■□□ 2.71
CHD1O14646 AL121672.3-201ENST00000608644 468 ntBASIC31.97■■■□□ 2.71
CHD1O14646 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC31.97■■■□□ 2.71
CHD1O14646 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC31.97■■■□□ 2.71
CHD1O14646 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
CHD1O14646 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CHD1O14646 BX119927.1-201ENST00000636596 1552 ntBASIC31.97■■■□□ 2.71
CHD1O14646 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC31.97■■■□□ 2.71
CHD1O14646 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CHD1O14646 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
CHD1O14646 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC31.97■■■□□ 2.71
CHD1O14646 BX276092.5-203ENST00000456199 560 ntBASIC31.97■■■□□ 2.71
CHD1O14646 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC31.97■■■□□ 2.71
CHD1O14646 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC31.97■■■□□ 2.71
CHD1O14646 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC31.97■■■□□ 2.71
CHD1O14646 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CHD1O14646 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CHD1O14646 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CHD1O14646 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CHD1O14646 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
CHD1O14646 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CHD1O14646 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC31.96■■■□□ 2.71
CHD1O14646 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC31.96■■■□□ 2.71
CHD1O14646 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CHD1O14646 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CHD1O14646 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CHD1O14646 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CHD1O14646 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
CHD1O14646 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CHD1O14646 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC31.95■■■□□ 2.71
CHD1O14646 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC31.95■■■□□ 2.71
CHD1O14646 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC31.95■■■□□ 2.71
CHD1O14646 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC31.95■■■□□ 2.71
CHD1O14646 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC31.95■■■□□ 2.71
CHD1O14646 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CHD1O14646 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
CHD1O14646 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC31.95■■■□□ 2.71
CHD1O14646 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CHD1O14646 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CHD1O14646 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC31.95■■■□□ 2.7
CHD1O14646 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC31.95■■■□□ 2.7
CHD1O14646 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.7
CHD1O14646 AC093525.10-201ENST00000625130 1569 ntBASIC31.95■■■□□ 2.7
CHD1O14646 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.7
CHD1O14646 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.7
CHD1O14646 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC31.95■■■□□ 2.7
CHD1O14646 AP002414.4-201ENST00000589764 1148 ntBASIC31.95■■■□□ 2.7
CHD1O14646 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC31.95■■■□□ 2.7
CHD1O14646 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC31.95■■■□□ 2.7
CHD1O14646 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CHD1O14646 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CHD1O14646 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC31.94■■■□□ 2.7
CHD1O14646 KRT18P13-201ENST00000400056 1290 ntBASIC31.94■■■□□ 2.7
CHD1O14646 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
CHD1O14646 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CHD1O14646 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
CHD1O14646 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC31.94■■■□□ 2.7
CHD1O14646 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CHD1O14646 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CHD1O14646 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC31.93■■■□□ 2.7
CHD1O14646 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CHD1O14646 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC31.93■■■□□ 2.7
CHD1O14646 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
CHD1O14646 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CHD1O14646 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms