Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
COPEO14579 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.62■□□□□ 0.73
COPEO14579 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
COPEO14579 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COPEO14579 PHGDH-210ENST00000641115 1638 ntBASIC19.62■□□□□ 0.73
COPEO14579 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPEO14579 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COPEO14579 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPEO14579 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.61■□□□□ 0.73
COPEO14579 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
COPEO14579 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPEO14579 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPEO14579 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COPEO14579 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COPEO14579 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPEO14579 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPEO14579 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPEO14579 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
COPEO14579 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
COPEO14579 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPEO14579 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPEO14579 MCRIP2P1-201ENST00000394346 511 ntBASIC19.61■□□□□ 0.73
COPEO14579 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.61■□□□□ 0.73
COPEO14579 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.61■□□□□ 0.73
COPEO14579 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
COPEO14579 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPEO14579 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.61■□□□□ 0.73
COPEO14579 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COPEO14579 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COPEO14579 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPEO14579 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COPEO14579 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.61■□□□□ 0.73
COPEO14579 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPEO14579 NEFHP1-201ENST00000412845 2629 ntBASIC19.6■□□□□ 0.73
COPEO14579 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPEO14579 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COPEO14579 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.6■□□□□ 0.73
COPEO14579 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPEO14579 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COPEO14579 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
COPEO14579 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.6■□□□□ 0.73
COPEO14579 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COPEO14579 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPEO14579 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPEO14579 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COPEO14579 AC007322.4-201ENST00000509611 723 ntBASIC19.6■□□□□ 0.73
COPEO14579 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPEO14579 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPEO14579 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COPEO14579 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPEO14579 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPEO14579 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COPEO14579 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.59■□□□□ 0.73
COPEO14579 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
COPEO14579 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.59■□□□□ 0.73
COPEO14579 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPEO14579 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPEO14579 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPEO14579 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.59■□□□□ 0.73
COPEO14579 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPEO14579 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.59■□□□□ 0.73
COPEO14579 AC105020.6-201ENST00000621523 1217 ntBASIC19.59■□□□□ 0.73
COPEO14579 AC013268.1-206ENST00000638368 961 ntBASIC19.59■□□□□ 0.73
COPEO14579 AC112229.1-201ENST00000639295 961 ntBASIC19.59■□□□□ 0.73
COPEO14579 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPEO14579 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
COPEO14579 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPEO14579 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPEO14579 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPEO14579 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPEO14579 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPEO14579 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPEO14579 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
COPEO14579 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPEO14579 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
COPEO14579 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.58■□□□□ 0.73
COPEO14579 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COPEO14579 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.58■□□□□ 0.72
COPEO14579 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.58■□□□□ 0.72
COPEO14579 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
COPEO14579 MFSD11-216ENST00000590393 1141 ntBASIC19.58■□□□□ 0.72
COPEO14579 AC100791.3-201ENST00000617619 330 ntBASIC19.58■□□□□ 0.72
COPEO14579 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.58■□□□□ 0.72
COPEO14579 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
COPEO14579 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.58■□□□□ 0.72
COPEO14579 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COPEO14579 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COPEO14579 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COPEO14579 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COPEO14579 AL138781.2-201ENST00000617896 1843 ntBASIC19.58■□□□□ 0.72
COPEO14579 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPEO14579 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPEO14579 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPEO14579 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
COPEO14579 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COPEO14579 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms