Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TAF4O00268 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TAF4O00268 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TAF4O00268 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.19■□□□□ 0.66
TAF4O00268 AC138932.1-201ENST00000534164 6830 ntBASIC19.19■□□□□ 0.66
TAF4O00268 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
TAF4O00268 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TAF4O00268 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.18■□□□□ 0.66
TAF4O00268 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TAF4O00268 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.18■□□□□ 0.66
TAF4O00268 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TAF4O00268 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TAF4O00268 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TAF4O00268 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.18■□□□□ 0.66
TAF4O00268 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.18■□□□□ 0.66
TAF4O00268 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.18■□□□□ 0.66
TAF4O00268 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TAF4O00268 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.18■□□□□ 0.66
TAF4O00268 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TAF4O00268 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
TAF4O00268 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.18■□□□□ 0.66
TAF4O00268 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TAF4O00268 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.18■□□□□ 0.66
TAF4O00268 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.18■□□□□ 0.66
TAF4O00268 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.18■□□□□ 0.66
TAF4O00268 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
TAF4O00268 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.18■□□□□ 0.66
TAF4O00268 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TAF4O00268 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TAF4O00268 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TAF4O00268 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TAF4O00268 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF4O00268 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF4O00268 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF4O00268 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF4O00268 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF4O00268 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TAF4O00268 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.17■□□□□ 0.66
TAF4O00268 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TAF4O00268 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.17■□□□□ 0.66
TAF4O00268 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.17■□□□□ 0.66
TAF4O00268 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
TAF4O00268 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TAF4O00268 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF4O00268 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
TAF4O00268 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.17■□□□□ 0.66
TAF4O00268 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.17■□□□□ 0.66
TAF4O00268 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TAF4O00268 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TAF4O00268 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TAF4O00268 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF4O00268 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.16■□□□□ 0.66
TAF4O00268 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TAF4O00268 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TAF4O00268 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.16■□□□□ 0.66
TAF4O00268 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.16■□□□□ 0.66
TAF4O00268 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TAF4O00268 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.16■□□□□ 0.66
TAF4O00268 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF4O00268 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TAF4O00268 FEM1AP1-201ENST00000431297 1995 ntBASIC19.16■□□□□ 0.66
TAF4O00268 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF4O00268 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF4O00268 AL390719.1-204ENST00000412397 1219 ntBASIC19.16■□□□□ 0.66
TAF4O00268 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.16■□□□□ 0.66
TAF4O00268 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF4O00268 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.16■□□□□ 0.66
TAF4O00268 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.16■□□□□ 0.66
TAF4O00268 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF4O00268 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF4O00268 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.16■□□□□ 0.66
TAF4O00268 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TAF4O00268 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
TAF4O00268 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF4O00268 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TAF4O00268 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TAF4O00268 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TAF4O00268 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.15■□□□□ 0.66
TAF4O00268 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TAF4O00268 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TAF4O00268 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TAF4O00268 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TAF4O00268 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TAF4O00268 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
TAF4O00268 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TAF4O00268 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TAF4O00268 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TAF4O00268 DUSP5P1-201ENST00000441325 1139 ntBASIC19.15■□□□□ 0.66
TAF4O00268 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.15■□□□□ 0.66
TAF4O00268 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.15■□□□□ 0.66
TAF4O00268 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.15■□□□□ 0.66
TAF4O00268 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.15■□□□□ 0.66
TAF4O00268 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.15■□□□□ 0.66
TAF4O00268 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TAF4O00268 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TAF4O00268 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.15■□□□□ 0.66
TAF4O00268 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TAF4O00268 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TAF4O00268 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.15■□□□□ 0.66
TAF4O00268 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms