Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
YJEFN3A6XGL0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YJEFN3A6XGL0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YJEFN3A6XGL0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
YJEFN3A6XGL0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YJEFN3A6XGL0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.53■□□□□ 0.88
YJEFN3A6XGL0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YJEFN3A6XGL0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
YJEFN3A6XGL0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
YJEFN3A6XGL0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
YJEFN3A6XGL0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
YJEFN3A6XGL0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 Z99916.2-201ENST00000604037 246 ntBASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.52■□□□□ 0.88
YJEFN3A6XGL0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
YJEFN3A6XGL0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
YJEFN3A6XGL0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
YJEFN3A6XGL0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
YJEFN3A6XGL0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 AC125437.2-201ENST00000625180 2167 ntBASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 TUBB8P6-201ENST00000436895 1288 ntBASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 AC093827.2-201ENST00000512654 315 ntBASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 RARRES2P10-201ENST00000564312 460 ntBASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 HTR7P1-201ENST00000538670 1336 ntBASIC20.51■□□□□ 0.87
YJEFN3A6XGL0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 AFG3L1P-217ENST00000557444 2447 ntBASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.5■□□□□ 0.87
YJEFN3A6XGL0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
YJEFN3A6XGL0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
YJEFN3A6XGL0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
YJEFN3A6XGL0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
YJEFN3A6XGL0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
YJEFN3A6XGL0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
YJEFN3A6XGL0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
YJEFN3A6XGL0 RPS2P55-201ENST00000397318 883 ntBASIC20.49■□□□□ 0.87
YJEFN3A6XGL0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
YJEFN3A6XGL0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
YJEFN3A6XGL0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
YJEFN3A6XGL0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
YJEFN3A6XGL0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
YJEFN3A6XGL0 AC107956.1-201ENST00000494359 873 ntBASIC20.49■□□□□ 0.87
YJEFN3A6XGL0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms