Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.89■□□□□ 0.93
RCCD1A6NED2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RCCD1A6NED2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.89■□□□□ 0.93
RCCD1A6NED2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.89■□□□□ 0.93
RCCD1A6NED2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RCCD1A6NED2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RCCD1A6NED2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.89■□□□□ 0.93
RCCD1A6NED2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RCCD1A6NED2 AC007613.1-201ENST00000572811 2597 ntBASIC20.89■□□□□ 0.93
RCCD1A6NED2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RCCD1A6NED2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
RCCD1A6NED2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.88■□□□□ 0.93
RCCD1A6NED2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RCCD1A6NED2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.88■□□□□ 0.93
RCCD1A6NED2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RCCD1A6NED2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RCCD1A6NED2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RCCD1A6NED2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RCCD1A6NED2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RCCD1A6NED2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RCCD1A6NED2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RCCD1A6NED2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RCCD1A6NED2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RCCD1A6NED2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.88■□□□□ 0.93
RCCD1A6NED2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.88■□□□□ 0.93
RCCD1A6NED2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RCCD1A6NED2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.88■□□□□ 0.93
RCCD1A6NED2 TEX21P-204ENST00000641479 1693 ntBASIC20.88■□□□□ 0.93
RCCD1A6NED2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RCCD1A6NED2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RCCD1A6NED2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RCCD1A6NED2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RCCD1A6NED2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
RCCD1A6NED2 AC010980.2-201ENST00000587099 1412 ntBASIC20.87■□□□□ 0.93
RCCD1A6NED2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RCCD1A6NED2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
RCCD1A6NED2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RCCD1A6NED2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RCCD1A6NED2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RCCD1A6NED2 AC104581.1-202ENST00000635932 2618 ntBASIC20.87■□□□□ 0.93
RCCD1A6NED2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.87■□□□□ 0.93
RCCD1A6NED2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RCCD1A6NED2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
RCCD1A6NED2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RCCD1A6NED2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RCCD1A6NED2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RCCD1A6NED2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RCCD1A6NED2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RCCD1A6NED2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.87■□□□□ 0.93
RCCD1A6NED2 MIR6821-201ENST00000617625 74 ntBASIC20.87■□□□□ 0.93
RCCD1A6NED2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.87■□□□□ 0.93
RCCD1A6NED2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RCCD1A6NED2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RCCD1A6NED2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RCCD1A6NED2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RCCD1A6NED2 AC006333.2-201ENST00000607957 2099 ntBASIC20.87■□□□□ 0.93
RCCD1A6NED2 AC018553.1-201ENST00000616682 1458 ntBASIC20.87■□□□□ 0.93
RCCD1A6NED2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RCCD1A6NED2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RCCD1A6NED2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RCCD1A6NED2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RCCD1A6NED2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.87■□□□□ 0.93
RCCD1A6NED2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.87■□□□□ 0.93
RCCD1A6NED2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RCCD1A6NED2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RCCD1A6NED2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RCCD1A6NED2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.86■□□□□ 0.93
RCCD1A6NED2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.86■□□□□ 0.93
RCCD1A6NED2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.86■□□□□ 0.93
RCCD1A6NED2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.86■□□□□ 0.93
RCCD1A6NED2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RCCD1A6NED2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RCCD1A6NED2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.86■□□□□ 0.93
RCCD1A6NED2 AC006015.1-201ENST00000429970 570 ntBASIC20.86■□□□□ 0.93
RCCD1A6NED2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RCCD1A6NED2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.86■□□□□ 0.93
RCCD1A6NED2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
RCCD1A6NED2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RCCD1A6NED2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.86■□□□□ 0.93
RCCD1A6NED2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RCCD1A6NED2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RCCD1A6NED2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RCCD1A6NED2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RCCD1A6NED2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RCCD1A6NED2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RCCD1A6NED2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RCCD1A6NED2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RCCD1A6NED2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RCCD1A6NED2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.86■□□□□ 0.93
RCCD1A6NED2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.85■□□□□ 0.93
RCCD1A6NED2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.85■□□□□ 0.93
RCCD1A6NED2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RCCD1A6NED2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RCCD1A6NED2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.85■□□□□ 0.93
RCCD1A6NED2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
RCCD1A6NED2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RCCD1A6NED2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RCCD1A6NED2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RCCD1A6NED2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.85■□□□□ 0.93
RCCD1A6NED2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms