Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 RPPH1-201ENST00000516869 333 ntBASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 RN7SL471P-201ENST00000580476 299 ntBASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AC069544.1-201ENST00000609399 999 ntBASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AC006557.6-201ENST00000623071 864 ntBASIC15.77■□□□□ 0.12
TCRBV4S1A1TA0A5B7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TCRBV4S1A1TA0A5B7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TCRBV4S1A1TA0A5B7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TCRBV4S1A1TA0A5B7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.77■□□□□ 0.11
TCRBV4S1A1TA0A5B7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TCRBV4S1A1TA0A5B7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TCRBV4S1A1TA0A5B7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC116562.4-201ENST00000641316 2276 ntBASIC15.77■□□□□ 0.11
TCRBV4S1A1TA0A5B7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC005829.2-201ENST00000571422 1056 ntBASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AL158211.5-201ENST00000623583 2518 ntBASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 BX119927.1-201ENST00000636596 1552 ntBASIC15.75■□□□□ 0.11
TCRBV4S1A1TA0A5B7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC233263.1-201ENST00000578059 224 ntBASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.74■□□□□ 0.11
TCRBV4S1A1TA0A5B7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms