Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUXBA0A1W2PPF3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.02■□□□□ 0.16
DUXBA0A1W2PPF3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUXBA0A1W2PPF3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUXBA0A1W2PPF3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUXBA0A1W2PPF3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUXBA0A1W2PPF3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
DUXBA0A1W2PPF3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUXBA0A1W2PPF3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.02■□□□□ 0.16
DUXBA0A1W2PPF3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUXBA0A1W2PPF3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DUXBA0A1W2PPF3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.02■□□□□ 0.16
DUXBA0A1W2PPF3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DUXBA0A1W2PPF3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DUXBA0A1W2PPF3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
DUXBA0A1W2PPF3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
DUXBA0A1W2PPF3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DUXBA0A1W2PPF3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
DUXBA0A1W2PPF3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
DUXBA0A1W2PPF3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 AL162412.1-201ENST00000567129 965 ntBASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DUXBA0A1W2PPF3 LETM1P2-201ENST00000597330 2178 ntBASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 TERF1P2-201ENST00000583350 1212 ntBASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 AL591742.1-201ENST00000604433 565 ntBASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 AL161938.1-201ENST00000569833 2180 ntBASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 AC008406.3-201ENST00000620001 1374 ntBASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DUXBA0A1W2PPF3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 AC141586.3-201ENST00000562166 1838 ntBASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DUXBA0A1W2PPF3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms