Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 AC069236.1-201ENST00000604339 616 ntBASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 AC008694.1-202ENST00000636953 945 ntBASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV21A0A0B4J279 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 PHGDH-210ENST00000641115 1638 ntBASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV21A0A0B4J279 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV21A0A0B4J279 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV21A0A0B4J279 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.58□□□□□ -0.07
TRAV21A0A0B4J279 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV21A0A0B4J279 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
TRAV21A0A0B4J279 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV21A0A0B4J279 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV21A0A0B4J279 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 AC016769.1-201ENST00000409132 1010 ntBASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRAV21A0A0B4J279 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV21A0A0B4J279 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRAV21A0A0B4J279 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV21A0A0B4J279 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV21A0A0B4J279 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV21A0A0B4J279 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV21A0A0B4J279 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
TRAV21A0A0B4J279 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV21A0A0B4J279 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV21A0A0B4J279 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV21A0A0B4J279 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV21A0A0B4J279 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRAV21A0A0B4J279 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms