Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 AP001271.2-201ENST00000624018 1556 ntBASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV12-1A0A0B4J245 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV12-1A0A0B4J245 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV12-1A0A0B4J245 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
TRAV12-1A0A0B4J245 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV12-1A0A0B4J245 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV12-1A0A0B4J245 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
TRAV12-1A0A0B4J245 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.77□□□□□ -0.2
TRAV12-1A0A0B4J245 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 AC011298.3-201ENST00000615796 283 ntBASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV12-1A0A0B4J245 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 KRT16P2-201ENST00000414673 1423 ntBASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms