Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 AL161637.1-201ENST00000622380 412 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 NCOA4P2-201ENST00000340589 1813 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 MIR1193-201ENST00000408109 78 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 ELOCP19-201ENST00000411919 318 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 RPS17P5-201ENST00000498293 408 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 CYCSP29-201ENST00000533731 318 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 AC095055.1-201ENST00000603472 1113 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 AL359757.1-201ENST00000623176 255 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 RN7SL205P-201ENST00000490174 284 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 OR4A17P-201ENST00000526032 904 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 RN7SL52P-201ENST00000584271 284 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 RN7SL722P-201ENST00000617780 284 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 RN7SL565P-201ENST00000618246 284 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 AC007996.1-201ENST00000620414 2821 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 SNORA70H-201ENST00000383910 135 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 SNORA70J-201ENST00000384182 135 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 GSTM5P1-201ENST00000434751 660 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 OSTCP1-201ENST00000455507 450 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 AC140172.1-201ENST00000502928 141 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 RN7SKP248-201ENST00000516278 305 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 AL109766.1-201ENST00000555080 552 ntBASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ALMS1Q8TCU4 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AC005725.1-201ENST00000577346 2607 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 MIR23A-201ENST00000385245 73 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 GAPDHP15-201ENST00000398586 975 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AL389915.1-201ENST00000422463 466 ntBASIC3.61□□□□□ -1.83
ALMS1Q8TCU4 AC007161.1-204ENST00000423039 460 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms