Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VARS2Q5ST30 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VARS2Q5ST30 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VARS2Q5ST30 MCC-209ENST00000515367 3844 ntTSL 5 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 OR5BR1P-201ENST00000524992 1330 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VARS2Q5ST30 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 CCDC190-203ENST00000367912 2605 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VARS2Q5ST30 NF1P8-201ENST00000415351 1461 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 AC051619.3-201ENST00000560646 2426 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
VARS2Q5ST30 CLDN8-201ENST00000399899 2068 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 GNG5P1-201ENST00000255500 204 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 RNU6-200P-201ENST00000364743 107 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 Y_RNA.350-201ENST00000365409 98 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
VARS2Q5ST30 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VARS2Q5ST30 MSRB1P1-201ENST00000396851 354 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 RPL23AP29-201ENST00000397284 453 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 RBMY2KP-201ENST00000418221 992 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 RPL31P12-201ENST00000422587 358 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 OR2AS1P-201ENST00000427827 319 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 CBX1P1-201ENST00000440184 427 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 TMSB4XP3-201ENST00000445144 114 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 AC107399.1-201ENST00000451226 265 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 AC007547.1-201ENST00000462177 490 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 RPS4XP10-201ENST00000465034 731 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 HIGD1AP14-201ENST00000507617 282 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 Y_RNA.703-201ENST00000516846 111 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 AC091982.1-201ENST00000518134 520 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 RGS5-218ENST00000526176 574 ntTSL 4 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 AP005435.4-201ENST00000529514 284 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 AL389895.1-201ENST00000554127 252 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 RPL23AP90-201ENST00000603820 236 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 AL390058.1-201ENST00000603834 629 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 MIR98-201ENST00000606724 119 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 AC007485.1-201ENST00000616755 206 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 AC092650.2-201ENST00000619984 902 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 SRP54-214ENST00000630962 162 ntTSL 5 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 AC063952.1-203ENST00000634410 658 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC8.59□□□□□ -1.03
VARS2Q5ST30 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VARS2Q5ST30 AC005538.2-201ENST00000623215 1864 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VARS2Q5ST30 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VARS2Q5ST30 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
VARS2Q5ST30 WDR95P-201ENST00000425638 1542 ntBASIC8.59□□□□□ -1.03
VARS2Q5ST30 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VARS2Q5ST30 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VARS2Q5ST30 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC8.59□□□□□ -1.04
VARS2Q5ST30 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
VARS2Q5ST30 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
VARS2Q5ST30 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 AC132825.1-201ENST00000463573 2247 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 CDR1-202ENST00000625883 1485 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 CNTNAP4-202ENST00000377504 4723 ntTSL 5 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 HMGB1P5-201ENST00000255320 642 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 RNA5SP378-201ENST00000363646 120 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 Y_RNA.288-201ENST00000364854 92 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VARS2Q5ST30 RN7SKP89-201ENST00000410774 242 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC8.58□□□□□ -1.04
VARS2Q5ST30 DUTP6-201ENST00000425573 462 ntBASIC8.58□□□□□ -1.04
VARS2Q5ST30 RPS27AP6-201ENST00000427962 448 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms