Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 RN7SL369P-201ENST00000477138 299 ntBASIC7.1□□□□□ -1.27
RTP1P59025 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC7.1□□□□□ -1.27
RTP1P59025 OR4D12P-201ENST00000509361 911 ntBASIC7.1□□□□□ -1.27
RTP1P59025 AC114781.3-201ENST00000512083 142 ntBASIC7.1□□□□□ -1.27
RTP1P59025 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.1□□□□□ -1.27
RTP1P59025 Y_RNA.667-201ENST00000516212 107 ntBASIC7.1□□□□□ -1.27
RTP1P59025 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RTP1P59025 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC7.1□□□□□ -1.27
RTP1P59025 IGHV4-55-201ENST00000520889 368 ntBASIC7.1□□□□□ -1.27
RTP1P59025 AC008429.4-201ENST00000521201 182 ntBASIC7.1□□□□□ -1.27
RTP1P59025 AC010306.1-201ENST00000523223 1117 ntBASIC7.1□□□□□ -1.27
RTP1P59025 MTCYBP20-201ENST00000524239 1129 ntBASIC7.1□□□□□ -1.27
RTP1P59025 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC7.1□□□□□ -1.27
RTP1P59025 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC7.1□□□□□ -1.27
RTP1P59025 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RTP1P59025 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.1□□□□□ -1.27
RTP1P59025 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC7.1□□□□□ -1.27
RTP1P59025 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RTP1P59025 AC007225.2-201ENST00000562529 256 ntBASIC7.1□□□□□ -1.27
RTP1P59025 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.1□□□□□ -1.27
RTP1P59025 MIR4489-201ENST00000578869 62 ntBASIC7.1□□□□□ -1.27
RTP1P59025 SNORD95-201ENST00000579879 68 ntBASIC7.1□□□□□ -1.27
RTP1P59025 MIR3176-201ENST00000582210 90 ntBASIC7.1□□□□□ -1.27
RTP1P59025 AL583856.2-201ENST00000606298 543 ntBASIC7.1□□□□□ -1.27
RTP1P59025 MIR6798-201ENST00000612887 67 ntBASIC7.1□□□□□ -1.27
RTP1P59025 AL512652.1-201ENST00000619006 500 ntBASIC7.1□□□□□ -1.27
RTP1P59025 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.1□□□□□ -1.27
RTP1P59025 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.1□□□□□ -1.27
RTP1P59025 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RTP1P59025 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RTP1P59025 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RTP1P59025 CUBNP3-201ENST00000457461 1784 ntBASIC7.1□□□□□ -1.27
RTP1P59025 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RTP1P59025 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RTP1P59025 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTP1P59025 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RTP1P59025 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RTP1P59025 SUCLA2P2-201ENST00000417269 1309 ntBASIC7.09□□□□□ -1.27
RTP1P59025 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTP1P59025 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTP1P59025 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
RTP1P59025 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RTP1P59025 Y_RNA.201-201ENST00000364052 96 ntBASIC7.09□□□□□ -1.27
RTP1P59025 BMS1P3-201ENST00000372011 932 ntBASIC7.09□□□□□ -1.27
RTP1P59025 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC7.09□□□□□ -1.27
RTP1P59025 FABP12P1-201ENST00000401911 322 ntBASIC7.09□□□□□ -1.27
RTP1P59025 RPL31-204ENST00000409038 817 ntTSL 2 BASIC7.09□□□□□ -1.27
RTP1P59025 NPM1P36-201ENST00000415681 835 ntBASIC7.09□□□□□ -1.27
RTP1P59025 TIMM9P2-201ENST00000419324 266 ntBASIC7.09□□□□□ -1.27
RTP1P59025 AL157884.1-201ENST00000424561 454 ntBASIC7.09□□□□□ -1.27
RTP1P59025 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC7.09□□□□□ -1.27
RTP1P59025 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.09□□□□□ -1.27
RTP1P59025 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC7.09□□□□□ -1.27
RTP1P59025 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RTP1P59025 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.09□□□□□ -1.27
RTP1P59025 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC7.09□□□□□ -1.27
RTP1P59025 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RTP1P59025 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.09□□□□□ -1.27
RTP1P59025 USP9YP25-201ENST00000457708 443 ntBASIC7.09□□□□□ -1.27
RTP1P59025 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RTP1P59025 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.09□□□□□ -1.27
RTP1P59025 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC7.09□□□□□ -1.27
RTP1P59025 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC7.09□□□□□ -1.27
RTP1P59025 MTCYBP16-201ENST00000509187 1129 ntBASIC7.09□□□□□ -1.27
RTP1P59025 OR5BM1P-201ENST00000512021 366 ntBASIC7.09□□□□□ -1.27
RTP1P59025 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC7.09□□□□□ -1.27
RTP1P59025 RNA5SP438-201ENST00000516561 112 ntBASIC7.09□□□□□ -1.27
RTP1P59025 IGKV2-19-201ENST00000518132 283 ntBASIC7.09□□□□□ -1.27
RTP1P59025 NAT2-202ENST00000520116 716 ntTSL 3 BASIC7.09□□□□□ -1.27
RTP1P59025 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.09□□□□□ -1.27
RTP1P59025 OR4A17P-201ENST00000526032 904 ntBASIC7.09□□□□□ -1.27
RTP1P59025 AP003396.4-201ENST00000527574 265 ntBASIC7.09□□□□□ -1.27
RTP1P59025 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC7.09□□□□□ -1.27
RTP1P59025 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.09□□□□□ -1.27
RTP1P59025 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RTP1P59025 MTND4P33-201ENST00000556706 766 ntBASIC7.09□□□□□ -1.27
RTP1P59025 AC092121.1-201ENST00000569452 202 ntBASIC7.09□□□□□ -1.27
RTP1P59025 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.09□□□□□ -1.27
RTP1P59025 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.09□□□□□ -1.27
RTP1P59025 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC7.09□□□□□ -1.27
RTP1P59025 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC7.09□□□□□ -1.27
RTP1P59025 AC068768.2-201ENST00000602352 343 ntBASIC7.09□□□□□ -1.27
RTP1P59025 AC068790.6-201ENST00000602558 258 ntBASIC7.09□□□□□ -1.27
RTP1P59025 AC073387.2-201ENST00000604797 784 ntBASIC7.09□□□□□ -1.27
RTP1P59025 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTP1P59025 AC245014.3-201ENST00000618589 347 ntBASIC7.09□□□□□ -1.27
RTP1P59025 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.09□□□□□ -1.27
RTP1P59025 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC7.09□□□□□ -1.27
RTP1P59025 AL132640.3-201ENST00000630473 177 ntBASIC7.09□□□□□ -1.27
RTP1P59025 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.09□□□□□ -1.27
RTP1P59025 AC053481.2-202ENST00000582394 1500 ntBASIC7.09□□□□□ -1.27
RTP1P59025 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
RTP1P59025 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTP1P59025 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.09□□□□□ -1.27
RTP1P59025 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.09□□□□□ -1.27
RTP1P59025 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RTP1P59025 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTP1P59025 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RTP1P59025 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
RTP1P59025 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 568.9 ms