Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
XRCC1P18887 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
XRCC1P18887 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
XRCC1P18887 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
XRCC1P18887 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
XRCC1P18887 MRE11P1-201ENST00000464884 2127 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
XRCC1P18887 LINC01963-201ENST00000562038 3148 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 RNU1-136P-201ENST00000384181 164 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 AL391422.1-201ENST00000402155 436 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.56□□□□□ -1.52
XRCC1P18887 GPS2P1-201ENST00000411761 986 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.56□□□□□ -1.52
XRCC1P18887 VN1R21P-201ENST00000426703 765 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 AC013410.1-201ENST00000436223 1232 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.56□□□□□ -1.52
XRCC1P18887 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.56□□□□□ -1.52
XRCC1P18887 RPS23P2-201ENST00000463671 415 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.56□□□□□ -1.52
XRCC1P18887 NPM1P28-201ENST00000492269 840 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 RN7SL466P-201ENST00000497546 295 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.56□□□□□ -1.52
XRCC1P18887 ASNSP4-201ENST00000511103 447 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.56□□□□□ -1.52
XRCC1P18887 AC021146.10-201ENST00000515628 706 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 NRBF2P4-201ENST00000520874 850 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.56□□□□□ -1.52
XRCC1P18887 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.56□□□□□ -1.52
XRCC1P18887 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.56□□□□□ -1.52
XRCC1P18887 ADAM3B-201ENST00000569937 840 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 AC002069.2-201ENST00000603580 883 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 NANOGP3-201ENST00000605855 286 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.56□□□□□ -1.52
XRCC1P18887 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.56□□□□□ -1.52
XRCC1P18887 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.56□□□□□ -1.52
XRCC1P18887 AL049767.1-202ENST00000637826 242 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
XRCC1P18887 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
XRCC1P18887 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
XRCC1P18887 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
XRCC1P18887 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
XRCC1P18887 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
XRCC1P18887 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
XRCC1P18887 SRRM1P3-201ENST00000426911 2678 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
XRCC1P18887 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
XRCC1P18887 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
XRCC1P18887 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
XRCC1P18887 AC002525.1-201ENST00000624392 1622 ntBASIC5.56□□□□□ -1.52
XRCC1P18887 LINC02019-201ENST00000608605 2060 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
XRCC1P18887 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.55□□□□□ -1.52
XRCC1P18887 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.55□□□□□ -1.52
XRCC1P18887 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
XRCC1P18887 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
XRCC1P18887 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 SNORA51.1-201ENST00000363243 140 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.55□□□□□ -1.52
XRCC1P18887 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
XRCC1P18887 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
XRCC1P18887 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
XRCC1P18887 PEX12P1-201ENST00000400284 1048 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 GAPDHP42-201ENST00000406848 981 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 RMRPP5-201ENST00000411156 267 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 AL133482.1-201ENST00000415988 498 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 NENFP1-201ENST00000419476 466 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 TNPO1P1-201ENST00000423641 1138 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.55□□□□□ -1.52
XRCC1P18887 AL121578.1-201ENST00000428051 892 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.55□□□□□ -1.52
XRCC1P18887 CYCSP51-201ENST00000443545 318 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.55□□□□□ -1.52
XRCC1P18887 LDHBP2-201ENST00000456969 1005 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
XRCC1P18887 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.55□□□□□ -1.52
XRCC1P18887 RPL7L1P4-201ENST00000513004 707 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.55□□□□□ -1.52
XRCC1P18887 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.55□□□□□ -1.52
XRCC1P18887 EIF4EP5-201ENST00000528228 640 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.55□□□□□ -1.52
XRCC1P18887 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.55□□□□□ -1.52
XRCC1P18887 MIR1273E-201ENST00000581165 102 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.55□□□□□ -1.52
XRCC1P18887 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.55□□□□□ -1.52
XRCC1P18887 AC015849.6-201ENST00000605454 474 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 AL022394.1-201ENST00000606979 292 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 AC109309.2-201ENST00000612597 332 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
XRCC1P18887 MIR6886-201ENST00000619864 61 ntBASIC5.55□□□□□ -1.52
XRCC1P18887 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.55□□□□□ -1.52
XRCC1P18887 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
XRCC1P18887 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.55□□□□□ -1.52
XRCC1P18887 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.55□□□□□ -1.52
XRCC1P18887 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.54□□□□□ -1.52
XRCC1P18887 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
XRCC1P18887 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
XRCC1P18887 MTCO1P11-201ENST00000429111 1528 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms