Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 RNU6-233P-201ENST00000410845 141 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AC245060.4-201ENST00000413293 1121 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 RPL19P16-201ENST00000433839 588 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AL596266.1-201ENST00000448132 400 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AC090804.1-201ENST00000448870 490 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AP006222.1-205ENST00000450734 457 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 PRPF38AP1-201ENST00000451976 933 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AC021660.1-201ENST00000465006 554 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 KATNBL1P4-201ENST00000503545 918 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 MYL12BP2-201ENST00000503948 512 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 RNA5SP271-201ENST00000516700 88 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 SCARNA6.1-201ENST00000516989 238 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AC139365.2-201ENST00000517972 253 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 CDC42P3-201ENST00000518493 633 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AC092709.1-201ENST00000521355 1045 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 HMGN2P36-201ENST00000529541 409 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AC108865.2-201ENST00000606881 432 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AC091305.2-201ENST00000624049 1576 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 SAMMSON-227ENST00000642114 1199 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 AC144833.1-201ENST00000567953 4089 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 Z83820.1-201ENST00000456978 1499 ntBASIC4.93□□□□□ -1.62
HLA-DPB1P04440 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPB1P04440 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 AC007618.1-201ENST00000366455 732 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 RPL21P67-201ENST00000402896 478 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 HMGN1P20-201ENST00000411849 300 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 IPPKP1-201ENST00000422501 768 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 SUMO2P8-201ENST00000434672 286 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 AL512637.1-201ENST00000439523 1231 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 RPL32P33-201ENST00000487023 394 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 AC023424.1-201ENST00000496058 459 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 EIF3KP3-201ENST00000514461 639 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 IGKV2-4-201ENST00000523070 340 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 NANOGNBP2-201ENST00000544753 553 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 MIR4311-201ENST00000580794 100 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 MIR6778-201ENST00000617912 73 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 AC022919.1-201ENST00000624979 626 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 MIR1910-201ENST00000636955 80 ntBASIC4.92□□□□□ -1.62
HLA-DPB1P04440 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms