Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
UPK1BO75841 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.64□□□□□ -1.67
UPK1BO75841 AC021146.3-201ENST00000511911 260 ntBASIC4.64□□□□□ -1.67
UPK1BO75841 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.64□□□□□ -1.67
UPK1BO75841 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.64□□□□□ -1.67
UPK1BO75841 AC022882.1-201ENST00000532142 501 ntBASIC4.64□□□□□ -1.67
UPK1BO75841 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.64□□□□□ -1.67
UPK1BO75841 HSPE1P2-201ENST00000554777 306 ntBASIC4.64□□□□□ -1.67
UPK1BO75841 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
UPK1BO75841 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
UPK1BO75841 AGGF1P9-201ENST00000561884 913 ntBASIC4.64□□□□□ -1.67
UPK1BO75841 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.64□□□□□ -1.67
UPK1BO75841 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC4.64□□□□□ -1.67
UPK1BO75841 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.64□□□□□ -1.67
UPK1BO75841 AL031429.2-201ENST00000602605 649 ntBASIC4.64□□□□□ -1.67
UPK1BO75841 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.64□□□□□ -1.67
UPK1BO75841 uc_338.18-201ENST00000615451 175 ntBASIC4.64□□□□□ -1.67
UPK1BO75841 AL121890.2-201ENST00000617644 465 ntBASIC4.64□□□□□ -1.67
UPK1BO75841 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.64□□□□□ -1.67
UPK1BO75841 AC079298.2-201ENST00000623885 459 ntBASIC4.64□□□□□ -1.67
UPK1BO75841 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
UPK1BO75841 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
UPK1BO75841 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
UPK1BO75841 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
UPK1BO75841 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
UPK1BO75841 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.64□□□□□ -1.67
UPK1BO75841 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.64□□□□□ -1.67
UPK1BO75841 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
UPK1BO75841 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
UPK1BO75841 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
UPK1BO75841 FANCD2P2-201ENST00000437591 1400 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
UPK1BO75841 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
UPK1BO75841 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
UPK1BO75841 AC023421.1-201ENST00000590535 1785 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
UPK1BO75841 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.63□□□□□ -1.67
UPK1BO75841 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.63□□□□□ -1.67
UPK1BO75841 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.63□□□□□ -1.67
UPK1BO75841 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
UPK1BO75841 MTHFD2P5-201ENST00000320415 844 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 RPL11P4-201ENST00000332269 436 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 ARSFP1-201ENST00000398758 477 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 DBIP1-201ENST00000401435 260 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 NENFP1-201ENST00000419476 466 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.63□□□□□ -1.67
UPK1BO75841 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC4.63□□□□□ -1.67
UPK1BO75841 NOP56P2-201ENST00000447491 769 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 EIF2S2P5-201ENST00000457635 968 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.63□□□□□ -1.67
UPK1BO75841 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC4.63□□□□□ -1.67
UPK1BO75841 AC024940.3-201ENST00000538551 316 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.63□□□□□ -1.67
UPK1BO75841 NF1P12-201ENST00000549593 583 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.63□□□□□ -1.67
UPK1BO75841 AC010547.7-201ENST00000570323 333 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 MIR4260-201ENST00000583107 67 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.63□□□□□ -1.67
UPK1BO75841 AC015849.6-201ENST00000605454 474 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.63□□□□□ -1.67
UPK1BO75841 AL451049.1-201ENST00000608672 497 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.63□□□□□ -1.67
UPK1BO75841 AL008582.1-201ENST00000609612 442 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 AC012100.3-201ENST00000624738 575 ntBASIC4.63□□□□□ -1.67
UPK1BO75841 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.63□□□□□ -1.67
UPK1BO75841 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
UPK1BO75841 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
UPK1BO75841 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
UPK1BO75841 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
UPK1BO75841 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
UPK1BO75841 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.62□□□□□ -1.67
UPK1BO75841 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.62□□□□□ -1.67
UPK1BO75841 AC104118.1-201ENST00000607625 1589 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.62□□□□□ -1.67
UPK1BO75841 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.62□□□□□ -1.67
UPK1BO75841 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
UPK1BO75841 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1BO75841 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.62□□□□□ -1.67
UPK1BO75841 AC005332.5-201ENST00000591222 2919 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1BO75841 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1BO75841 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1BO75841 RNA5SP485-201ENST00000365053 119 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
UPK1BO75841 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1BO75841 AL445213.1-201ENST00000412589 747 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 OR2AT2P-201ENST00000413438 905 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 TMBIM7P-201ENST00000418074 855 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 AL360013.1-201ENST00000419031 858 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1BO75841 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.62□□□□□ -1.67
UPK1BO75841 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.62□□□□□ -1.67
UPK1BO75841 GAPDHP58-201ENST00000438477 1006 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.62□□□□□ -1.67
UPK1BO75841 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.62□□□□□ -1.67
UPK1BO75841 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.62□□□□□ -1.67
UPK1BO75841 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.62□□□□□ -1.67
UPK1BO75841 AC092865.4-201ENST00000477936 615 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 DEFB109F-201ENST00000491870 277 ntBASIC4.62□□□□□ -1.67
UPK1BO75841 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms