Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AL669830.1-201ENST00000621457 656 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC079456.1-201ENST00000624010 480 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 AC108751.5-201ENST00000492880 1336 ntBASIC2.92□□□□□ -1.94
CHKB-CPT1BH3BT56 RLIMP2-201ENST00000427891 1563 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC017104.4-201ENST00000636283 1592 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 HSPA8P17-201ENST00000427029 1382 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 PPIAP24-201ENST00000328558 471 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 OR56A4-201ENST00000330728 1209 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 RNU1-21P-201ENST00000363327 163 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AL133412.1-201ENST00000380194 2992 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 U3.52-201ENST00000384034 216 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 SNORA35-201ENST00000386104 128 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 RNU6-1320P-201ENST00000390838 107 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 RNU6-1269P-201ENST00000391139 107 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 PDCL3P5-201ENST00000398028 722 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 ELF5-203ENST00000429939 637 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC091132.2-201ENST00000433601 769 ntTSL 3 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC105052.2-201ENST00000434317 794 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 ANXA2P2-201ENST00000435128 1020 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 P2RX6P-201ENST00000439119 468 ntTSL 3 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC015983.1-201ENST00000441577 373 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 DBIL5P2-201ENST00000443827 253 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC019080.2-201ENST00000453859 394 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 RNU6-599P-201ENST00000459383 107 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 RNU6-1193P-201ENST00000459461 107 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AL928654.1-201ENST00000476081 354 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 RN7SL727P-201ENST00000482164 296 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 RN7SL350P-201ENST00000492591 299 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC018797.3-201ENST00000513388 1241 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC093281.1-201ENST00000514239 549 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 HMGN1P9-201ENST00000515212 298 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 BUD31P1-201ENST00000521828 359 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AP001858.2-201ENST00000536213 601 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC02403-201ENST00000548215 484 ntTSL 3 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AL359715.3-201ENST00000569267 2123 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 GARSP1-201ENST00000570895 719 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 MIR378H-201ENST00000579966 83 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 MIR4428-201ENST00000584884 73 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 ELOCP28-201ENST00000590044 317 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 RPL27-207ENST00000590864 569 ntTSL 2 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC008536.1-201ENST00000602872 669 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC092960.1-201ENST00000604762 351 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC073389.3-201ENST00000609434 935 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC004825.2-201ENST00000616634 455 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 RNU6-368P-201ENST00000620928 107 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 RNU6-538P-201ENST00000622329 107 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 MIR6715B-201ENST00000637172 77 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 OR5AU1-204ENST00000641822 1197 ntBASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHKB-CPT1BH3BT56 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms