Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 RNA5SP397-201ENST00000391323 118 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AC104164.1-201ENST00000460282 590 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 RPL7L1P13-201ENST00000511702 739 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 SNORA70.24-201ENST00000517233 118 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AC034229.6-201ENST00000623704 224 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 CELSR2-201ENST00000271332 10534 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 TNPO1P2-201ENST00000426249 2665 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AF186996.5-201ENST00000418098 904 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 GOT2P5-201ENST00000433995 546 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 ARL2BPP10-201ENST00000446487 531 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 VDAC2P4-201ENST00000452925 711 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AC117395.1-201ENST00000487390 403 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 COL11A1-203ENST00000370096 7286 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 OR8V1P-201ENST00000395193 873 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 CYP4F32P-201ENST00000426492 504 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AL117339.2-201ENST00000430475 180 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AL035246.1-201ENST00000433554 1255 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 RN7SL132P-201ENST00000478131 296 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 SOD1P3-201ENST00000518682 454 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 AL132640.3-201ENST00000630473 177 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 KIAA1644-201ENST00000381176 6751 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 ITPK1-AS1-201ENST00000553639 4701 ntBASIC2.16□□□□□ -2.06
MACF1Q9UPN3 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MACF1Q9UPN3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 AL672138.1-201ENST00000450604 1015 ntBASIC2.15□□□□□ -2.06
MACF1Q9UPN3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 AC009951.1-201ENST00000623674 2614 ntBASIC2.15□□□□□ -2.06
MACF1Q9UPN3 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 DYNC1I2P1-201ENST00000435916 1838 ntBASIC2.15□□□□□ -2.06
MACF1Q9UPN3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
MACF1Q9UPN3 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC2.15□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms