Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC084824.2-201ENST00000548906 345 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 HMGN2P47-201ENST00000559378 272 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 MIR4433B-201ENST00000581329 102 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 AC074141.1-201ENST00000588129 2995 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 AC073387.2-201ENST00000604797 784 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 OR2BH1P-201ENST00000608850 864 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 TTC41P-205ENST00000551270 3963 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 AC093297.3-201ENST00000607056 2517 ntBASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC144BQ3MJ40 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC027575.3-201ENST00000583058 2747 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AL360271.1-201ENST00000395679 510 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC233289.1-201ENST00000403700 508 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 MTATP6P20-201ENST00000414147 562 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AL590004.3-202ENST00000445883 451 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC097463.1-201ENST00000447288 481 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 GTF2IP12-201ENST00000456547 356 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC084754.1-201ENST00000463466 464 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 RN7SKP248-201ENST00000516278 305 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC026407.1-201ENST00000518369 204 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 OR8G5-201ENST00000524943 1041 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 OR8K4P-201ENST00000534608 872 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 RBM22P12-201ENST00000567098 1255 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AP005136.2-201ENST00000583253 1049 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC008507.3-201ENST00000585753 472 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 SNORA74.4-201ENST00000607595 199 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC092266.1-201ENST00000610958 165 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC018628.1-201ENST00000624147 3819 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 HSPD1P9-201ENST00000420325 1636 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 AC005725.1-201ENST00000577346 2607 ntBASIC7.25□□□□□ -1.25
CCDC144BQ3MJ40 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 SAGE3P-201ENST00000619800 1635 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 METTL21EP-201ENST00000298105 713 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 RNU5B-1-201ENST00000363286 116 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 U6.112-201ENST00000384129 70 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 SNORA51.9-201ENST00000384295 124 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 RNU6-532P-201ENST00000384318 107 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 HMGN1P20-201ENST00000411849 300 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 MTCO3P4-201ENST00000419236 787 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AC066692.1-201ENST00000421721 457 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 BX679664.2-201ENST00000439282 283 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 LRRC37A14P-201ENST00000452297 462 ntBASIC7.24□□□□□ -1.25
CCDC144BQ3MJ40 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms