Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AL360013.1-201ENST00000419031 858 ntBASIC4.92□□□□□ -1.62
VBP1P61758 AC104333.2-201ENST00000422630 192 ntBASIC4.92□□□□□ -1.62
VBP1P61758 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.92□□□□□ -1.62
VBP1P61758 AC017019.1-201ENST00000426129 261 ntBASIC4.92□□□□□ -1.62
VBP1P61758 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.92□□□□□ -1.62
VBP1P61758 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.92□□□□□ -1.62
VBP1P61758 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.92□□□□□ -1.62
VBP1P61758 GTF3AP5-201ENST00000442645 697 ntBASIC4.92□□□□□ -1.62
VBP1P61758 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC4.92□□□□□ -1.62
VBP1P61758 RBMY2TP-201ENST00000451162 947 ntBASIC4.92□□□□□ -1.62
VBP1P61758 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.92□□□□□ -1.62
VBP1P61758 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.92□□□□□ -1.62
VBP1P61758 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC4.92□□□□□ -1.62
VBP1P61758 AC107015.1-201ENST00000466902 747 ntBASIC4.92□□□□□ -1.62
VBP1P61758 RPS4XP17-201ENST00000479057 754 ntBASIC4.92□□□□□ -1.62
VBP1P61758 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.92□□□□□ -1.62
VBP1P61758 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.92□□□□□ -1.62
VBP1P61758 SCARNA20.4-201ENST00000516969 131 ntBASIC4.92□□□□□ -1.62
VBP1P61758 AC139365.2-201ENST00000517972 253 ntBASIC4.92□□□□□ -1.62
VBP1P61758 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC4.92□□□□□ -1.62
VBP1P61758 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.92□□□□□ -1.62
VBP1P61758 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.92□□□□□ -1.62
VBP1P61758 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.92□□□□□ -1.62
VBP1P61758 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VBP1P61758 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.92□□□□□ -1.62
VBP1P61758 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VBP1P61758 AC037479.1-201ENST00000558361 625 ntBASIC4.92□□□□□ -1.62
VBP1P61758 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.92□□□□□ -1.62
VBP1P61758 AC096996.1-201ENST00000563813 325 ntBASIC4.92□□□□□ -1.62
VBP1P61758 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VBP1P61758 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.92□□□□□ -1.62
VBP1P61758 AL365181.4-201ENST00000609800 547 ntBASIC4.92□□□□□ -1.62
VBP1P61758 MIR6849-201ENST00000618543 69 ntBASIC4.92□□□□□ -1.62
VBP1P61758 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.92□□□□□ -1.62
VBP1P61758 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.92□□□□□ -1.62
VBP1P61758 AC073869.10-201ENST00000642016 354 ntBASIC4.92□□□□□ -1.62
VBP1P61758 MAPK10-349ENST00000641767 3661 ntBASIC4.92□□□□□ -1.62
VBP1P61758 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.92□□□□□ -1.62
VBP1P61758 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VBP1P61758 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
VBP1P61758 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.92□□□□□ -1.62
VBP1P61758 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
VBP1P61758 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
VBP1P61758 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
VBP1P61758 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VBP1P61758 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.91□□□□□ -1.62
VBP1P61758 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VBP1P61758 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VBP1P61758 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VBP1P61758 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.91□□□□□ -1.62
VBP1P61758 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.91□□□□□ -1.62
VBP1P61758 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VBP1P61758 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VBP1P61758 RNA5SP110-201ENST00000362638 115 ntBASIC4.91□□□□□ -1.62
VBP1P61758 RNA5SP85-201ENST00000365378 119 ntBASIC4.91□□□□□ -1.62
VBP1P61758 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
VBP1P61758 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VBP1P61758 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
VBP1P61758 AL357752.1-201ENST00000412817 349 ntBASIC4.91□□□□□ -1.62
VBP1P61758 PCNPP4-201ENST00000414817 517 ntBASIC4.91□□□□□ -1.62
VBP1P61758 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.91□□□□□ -1.62
VBP1P61758 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.91□□□□□ -1.62
VBP1P61758 AC239800.1-201ENST00000442049 719 ntBASIC4.91□□□□□ -1.62
VBP1P61758 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VBP1P61758 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VBP1P61758 AL596266.1-201ENST00000448132 400 ntBASIC4.91□□□□□ -1.62
VBP1P61758 PRELID1P3-201ENST00000450055 643 ntBASIC4.91□□□□□ -1.62
VBP1P61758 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.91□□□□□ -1.62
VBP1P61758 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.91□□□□□ -1.62
VBP1P61758 AC009567.2-201ENST00000502989 349 ntBASIC4.91□□□□□ -1.62
VBP1P61758 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.91□□□□□ -1.62
VBP1P61758 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC4.91□□□□□ -1.62
VBP1P61758 OSTC-204ENST00000512478 663 ntTSL 5 BASIC4.91□□□□□ -1.62
VBP1P61758 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC4.91□□□□□ -1.62
VBP1P61758 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.91□□□□□ -1.62
VBP1P61758 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.91□□□□□ -1.62
VBP1P61758 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.91□□□□□ -1.62
VBP1P61758 AC084121.1-201ENST00000533882 835 ntBASIC4.91□□□□□ -1.62
VBP1P61758 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.91□□□□□ -1.62
VBP1P61758 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VBP1P61758 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
VBP1P61758 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.91□□□□□ -1.62
VBP1P61758 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.91□□□□□ -1.62
VBP1P61758 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
VBP1P61758 FCGR1CP-201ENST00000579737 1127 ntBASIC4.91□□□□□ -1.62
VBP1P61758 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.91□□□□□ -1.62
VBP1P61758 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.91□□□□□ -1.62
VBP1P61758 AC036176.3-201ENST00000602456 418 ntBASIC4.91□□□□□ -1.62
VBP1P61758 RPSAP75-201ENST00000605848 301 ntBASIC4.91□□□□□ -1.62
VBP1P61758 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.91□□□□□ -1.62
VBP1P61758 uc_338.31-201ENST00000615595 186 ntBASIC4.91□□□□□ -1.62
VBP1P61758 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.91□□□□□ -1.62
VBP1P61758 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.91□□□□□ -1.62
VBP1P61758 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VBP1P61758 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VBP1P61758 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VBP1P61758 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VBP1P61758 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
VBP1P61758 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.91□□□□□ -1.62
VBP1P61758 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms