Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC9.2□□□□□ -0.94
ATN1P54259 AP005902.2-201ENST00000518393 307 ntBASIC9.2□□□□□ -0.94
ATN1P54259 DEFB131D-201ENST00000526803 184 ntBASIC9.2□□□□□ -0.94
ATN1P54259 AC092332.1-201ENST00000563684 829 ntBASIC9.2□□□□□ -0.94
ATN1P54259 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC9.2□□□□□ -0.94
ATN1P54259 AL606760.4-201ENST00000617613 718 ntBASIC9.2□□□□□ -0.94
ATN1P54259 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC9.2□□□□□ -0.94
ATN1P54259 AP000787.3-201ENST00000634407 307 ntBASIC9.2□□□□□ -0.94
ATN1P54259 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
ATN1P54259 MAGOHB-201ENST00000320756 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
ATN1P54259 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
ATN1P54259 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC9.2□□□□□ -0.94
ATN1P54259 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
ATN1P54259 OSBPL9P1-201ENST00000604744 1469 ntBASIC9.2□□□□□ -0.94
ATN1P54259 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
ATN1P54259 MAPK10-255ENST00000641020 2412 ntBASIC9.2□□□□□ -0.94
ATN1P54259 FAM193A-203ENST00000502458 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
ATN1P54259 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC9.19□□□□□ -0.94
ATN1P54259 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC9.19□□□□□ -0.94
ATN1P54259 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 NDUFS1-203ENST00000432169 2080 ntTSL 2 BASIC9.19□□□□□ -0.94
ATN1P54259 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 USP2-AS1-201ENST00000498979 2486 ntTSL 3 BASIC9.19□□□□□ -0.94
ATN1P54259 RNU6-545P-201ENST00000362681 104 ntBASIC9.19□□□□□ -0.94
ATN1P54259 RNA5SP378-201ENST00000363646 120 ntBASIC9.19□□□□□ -0.94
ATN1P54259 Y_RNA.462-201ENST00000384268 102 ntBASIC9.19□□□□□ -0.94
ATN1P54259 MIR595-201ENST00000384905 96 ntBASIC9.19□□□□□ -0.94
ATN1P54259 PHBP1-201ENST00000392260 808 ntBASIC9.19□□□□□ -0.94
ATN1P54259 MED28P1-201ENST00000399158 571 ntBASIC9.19□□□□□ -0.94
ATN1P54259 AL139397.2-201ENST00000404529 772 ntBASIC9.19□□□□□ -0.94
ATN1P54259 MIR1302-6-201ENST00000408466 90 ntBASIC9.19□□□□□ -0.94
ATN1P54259 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC9.19□□□□□ -0.94
ATN1P54259 RN7SKP127-201ENST00000410443 354 ntBASIC9.19□□□□□ -0.94
ATN1P54259 RNU2-38P-201ENST00000410856 79 ntBASIC9.19□□□□□ -0.94
ATN1P54259 RN7SKP144-201ENST00000411108 279 ntBASIC9.19□□□□□ -0.94
ATN1P54259 UBE2FP1-201ENST00000416536 447 ntBASIC9.19□□□□□ -0.94
ATN1P54259 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC9.19□□□□□ -0.94
ATN1P54259 AL590609.2-201ENST00000421430 368 ntBASIC9.19□□□□□ -0.94
ATN1P54259 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC9.19□□□□□ -0.94
ATN1P54259 WDR82P1-201ENST00000439836 939 ntBASIC9.19□□□□□ -0.94
ATN1P54259 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 GSTA11P-201ENST00000452866 669 ntBASIC9.19□□□□□ -0.94
ATN1P54259 AL163973.1-201ENST00000484753 577 ntBASIC9.19□□□□□ -0.94
ATN1P54259 AC106872.3-201ENST00000495104 446 ntBASIC9.19□□□□□ -0.94
ATN1P54259 AC097263.1-201ENST00000496795 606 ntBASIC9.19□□□□□ -0.94
ATN1P54259 AC108865.1-201ENST00000507644 496 ntTSL 3 BASIC9.19□□□□□ -0.94
ATN1P54259 SLC25A15P5-201ENST00000508033 253 ntBASIC9.19□□□□□ -0.94
ATN1P54259 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC9.19□□□□□ -0.94
ATN1P54259 AP004607.5-201ENST00000532034 217 ntBASIC9.19□□□□□ -0.94
ATN1P54259 AC073913.2-201ENST00000541512 145 ntBASIC9.19□□□□□ -0.94
ATN1P54259 AL117190.2-201ENST00000554041 289 ntTSL 2 BASIC9.19□□□□□ -0.94
ATN1P54259 CYCSP2-201ENST00000558168 301 ntBASIC9.19□□□□□ -0.94
ATN1P54259 AC022400.4-201ENST00000604613 286 ntBASIC9.19□□□□□ -0.94
ATN1P54259 AL591167.1-201ENST00000607321 456 ntBASIC9.19□□□□□ -0.94
ATN1P54259 MIR6774-201ENST00000614651 70 ntBASIC9.19□□□□□ -0.94
ATN1P54259 RN7SL301P-202ENST00000618767 298 ntBASIC9.19□□□□□ -0.94
ATN1P54259 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC9.19□□□□□ -0.94
ATN1P54259 WDR75-207ENST00000631047 270 ntTSL 5 BASIC9.19□□□□□ -0.94
ATN1P54259 AC140479.4-205ENST00000636339 820 ntBASIC9.19□□□□□ -0.94
ATN1P54259 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC9.19□□□□□ -0.94
ATN1P54259 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 ZNF143-204ENST00000396604 2696 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
ATN1P54259 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
ATN1P54259 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
ATN1P54259 SUMO2-202ENST00000420826 3190 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 ITIH4-201ENST00000266041 3336 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 NRXN3-215ENST00000557594 3381 ntTSL 2 BASIC9.19□□□□□ -0.94
ATN1P54259 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 AC009135.2-201ENST00000624136 1768 ntBASIC9.19□□□□□ -0.94
ATN1P54259 AC132825.4-201ENST00000582527 3644 ntBASIC9.19□□□□□ -0.94
ATN1P54259 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC9.19□□□□□ -0.94
ATN1P54259 AC092279.2-201ENST00000623742 2189 ntBASIC9.19□□□□□ -0.94
ATN1P54259 MAP7D3-203ENST00000370661 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
ATN1P54259 TCF4-226ENST00000565018 2357 ntTSL 5 BASIC9.19□□□□□ -0.94
ATN1P54259 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
ATN1P54259 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC9.19□□□□□ -0.94
ATN1P54259 DDX3Y-202ENST00000360160 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ATN1P54259 C3P1-202ENST00000497718 4954 ntBASIC9.18□□□□□ -0.94
ATN1P54259 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
ATN1P54259 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ATN1P54259 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
ATN1P54259 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ATN1P54259 RPL10P16-201ENST00000325000 645 ntBASIC9.18□□□□□ -0.94
ATN1P54259 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ATN1P54259 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
ATN1P54259 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ATN1P54259 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms