Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CPS1P31327 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CPS1P31327 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CPS1P31327 SDAD1P1-202ENST00000524156 2051 ntBASIC7.7□□□□□ -1.18
CPS1P31327 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CPS1P31327 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
CPS1P31327 IQCB2P-201ENST00000401788 1633 ntBASIC7.69□□□□□ -1.18
CPS1P31327 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CPS1P31327 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.69□□□□□ -1.18
CPS1P31327 AL589993.1-201ENST00000407450 2524 ntBASIC7.69□□□□□ -1.18
CPS1P31327 RNU1-146P-201ENST00000364015 165 ntBASIC7.69□□□□□ -1.18
CPS1P31327 RPSAP35-201ENST00000413753 818 ntBASIC7.69□□□□□ -1.18
CPS1P31327 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.69□□□□□ -1.18
CPS1P31327 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.69□□□□□ -1.18
CPS1P31327 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.69□□□□□ -1.18
CPS1P31327 PMS2P3-207ENST00000529061 717 ntBASIC7.69□□□□□ -1.18
CPS1P31327 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CPS1P31327 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC7.69□□□□□ -1.18
CPS1P31327 AC060766.1-201ENST00000590824 627 ntBASIC7.69□□□□□ -1.18
CPS1P31327 AL162431.4-201ENST00000604674 411 ntBASIC7.69□□□□□ -1.18
CPS1P31327 AL109618.2-201ENST00000605527 211 ntBASIC7.69□□□□□ -1.18
CPS1P31327 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.69□□□□□ -1.18
CPS1P31327 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
CPS1P31327 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CPS1P31327 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.69□□□□□ -1.18
CPS1P31327 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CPS1P31327 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CPS1P31327 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CPS1P31327 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.69□□□□□ -1.18
CPS1P31327 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CPS1P31327 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
CPS1P31327 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.69□□□□□ -1.18
CPS1P31327 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CPS1P31327 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
CPS1P31327 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC7.69□□□□□ -1.18
CPS1P31327 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
CPS1P31327 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.69□□□□□ -1.18
CPS1P31327 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CPS1P31327 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.68□□□□□ -1.18
CPS1P31327 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
CPS1P31327 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.68□□□□□ -1.18
CPS1P31327 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 FHIT-201ENST00000341848 174 ntTSL 3 BASIC7.68□□□□□ -1.18
CPS1P31327 GLULP6-201ENST00000399502 913 ntBASIC7.68□□□□□ -1.18
CPS1P31327 SNX10-203ENST00000409367 746 ntTSL 5 BASIC7.68□□□□□ -1.18
CPS1P31327 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC7.68□□□□□ -1.18
CPS1P31327 AL590399.4-201ENST00000436561 601 ntBASIC7.68□□□□□ -1.18
CPS1P31327 NANOGP9-201ENST00000439890 892 ntBASIC7.68□□□□□ -1.18
CPS1P31327 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.68□□□□□ -1.18
CPS1P31327 AC009127.1-201ENST00000467090 155 ntBASIC7.68□□□□□ -1.18
CPS1P31327 AC079080.1-201ENST00000479841 822 ntBASIC7.68□□□□□ -1.18
CPS1P31327 RN7SKP122-201ENST00000515923 296 ntBASIC7.68□□□□□ -1.18
CPS1P31327 AP002981.1-201ENST00000517692 975 ntBASIC7.68□□□□□ -1.18
CPS1P31327 AC100784.1-201ENST00000522790 310 ntBASIC7.68□□□□□ -1.18
CPS1P31327 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC7.68□□□□□ -1.18
CPS1P31327 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
CPS1P31327 AC008033.2-201ENST00000542626 177 ntBASIC7.68□□□□□ -1.18
CPS1P31327 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC7.68□□□□□ -1.18
CPS1P31327 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 AC099654.6-201ENST00000636487 512 ntBASIC7.68□□□□□ -1.18
CPS1P31327 FTO-223ENST00000640179 210 ntTSL 5 BASIC7.68□□□□□ -1.18
CPS1P31327 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CPS1P31327 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
CPS1P31327 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 RPS17P17-201ENST00000419392 409 ntBASIC7.68□□□□□ -1.18
CPS1P31327 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC7.68□□□□□ -1.18
CPS1P31327 GAPDHP25-201ENST00000447061 1001 ntBASIC7.68□□□□□ -1.18
CPS1P31327 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC7.68□□□□□ -1.18
CPS1P31327 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC7.68□□□□□ -1.18
CPS1P31327 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CPS1P31327 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CPS1P31327 SNORA70.11-201ENST00000515987 138 ntBASIC7.68□□□□□ -1.18
CPS1P31327 SNORA70.13-201ENST00000516116 138 ntBASIC7.68□□□□□ -1.18
CPS1P31327 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.68□□□□□ -1.18
CPS1P31327 MIR4691-201ENST00000583764 85 ntBASIC7.68□□□□□ -1.18
CPS1P31327 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CPS1P31327 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CPS1P31327 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CPS1P31327 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CPS1P31327 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.67□□□□□ -1.18
CPS1P31327 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.67□□□□□ -1.18
CPS1P31327 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CPS1P31327 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
CPS1P31327 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms