Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TMEM183AP1-205ENST00000432739 290 ntBASIC4.67□□□□□ -1.66
COL8A2P25067 CYCSP6-201ENST00000434498 302 ntBASIC4.67□□□□□ -1.66
COL8A2P25067 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.67□□□□□ -1.66
COL8A2P25067 AC090058.1-201ENST00000498788 435 ntBASIC4.67□□□□□ -1.66
COL8A2P25067 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL8A2P25067 AC008638.1-201ENST00000506035 866 ntBASIC4.67□□□□□ -1.66
COL8A2P25067 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.67□□□□□ -1.66
COL8A2P25067 RNA5SP34-201ENST00000516887 130 ntBASIC4.67□□□□□ -1.66
COL8A2P25067 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.67□□□□□ -1.66
COL8A2P25067 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.67□□□□□ -1.66
COL8A2P25067 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.67□□□□□ -1.66
COL8A2P25067 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.67□□□□□ -1.66
COL8A2P25067 AP001267.4-201ENST00000602598 545 ntBASIC4.67□□□□□ -1.66
COL8A2P25067 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.67□□□□□ -1.66
COL8A2P25067 SDR42E1P1-201ENST00000611327 477 ntBASIC4.67□□□□□ -1.66
COL8A2P25067 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.67□□□□□ -1.66
COL8A2P25067 MIR6837-201ENST00000620884 64 ntBASIC4.67□□□□□ -1.66
COL8A2P25067 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.67□□□□□ -1.66
COL8A2P25067 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.67□□□□□ -1.66
COL8A2P25067 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.67□□□□□ -1.66
COL8A2P25067 SAMMSON-209ENST00000641222 1100 ntBASIC4.67□□□□□ -1.66
COL8A2P25067 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
COL8A2P25067 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL8A2P25067 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.67□□□□□ -1.66
COL8A2P25067 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.67□□□□□ -1.66
COL8A2P25067 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
COL8A2P25067 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
COL8A2P25067 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL8A2P25067 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
COL8A2P25067 LINC01963-201ENST00000562038 3148 ntBASIC4.67□□□□□ -1.66
COL8A2P25067 AC235565.1-201ENST00000456962 1325 ntBASIC4.67□□□□□ -1.66
COL8A2P25067 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL8A2P25067 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
COL8A2P25067 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.67□□□□□ -1.66
COL8A2P25067 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL8A2P25067 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL8A2P25067 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL8A2P25067 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.66□□□□□ -1.66
COL8A2P25067 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.66□□□□□ -1.66
COL8A2P25067 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL8A2P25067 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.66□□□□□ -1.66
COL8A2P25067 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.66□□□□□ -1.66
COL8A2P25067 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL8A2P25067 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.66□□□□□ -1.66
COL8A2P25067 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL8A2P25067 U3.7-201ENST00000363668 216 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
COL8A2P25067 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.66□□□□□ -1.66
COL8A2P25067 SNORA16A-201ENST00000384342 137 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COL8A2P25067 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.66□□□□□ -1.66
COL8A2P25067 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.66□□□□□ -1.66
COL8A2P25067 RNF10P1-201ENST00000418589 369 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.66□□□□□ -1.66
COL8A2P25067 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.66□□□□□ -1.66
COL8A2P25067 NANOGP9-201ENST00000439890 892 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 AC026348.1-201ENST00000462549 1053 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.66□□□□□ -1.66
COL8A2P25067 SNRPCP3-201ENST00000474888 476 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 RPL7P39-201ENST00000481157 744 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 PGAM1P13-201ENST00000507497 754 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.66□□□□□ -1.66
COL8A2P25067 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.66□□□□□ -1.66
COL8A2P25067 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.66□□□□□ -1.66
COL8A2P25067 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.66□□□□□ -1.66
COL8A2P25067 RN7SKP253-201ENST00000516424 309 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 AC027308.1-201ENST00000517993 110 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.66□□□□□ -1.66
COL8A2P25067 PMS2P3-207ENST00000529061 717 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.66□□□□□ -1.66
COL8A2P25067 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL8A2P25067 AP005403.1-201ENST00000579720 229 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.66□□□□□ -1.66
COL8A2P25067 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.66□□□□□ -1.66
COL8A2P25067 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.66□□□□□ -1.66
COL8A2P25067 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.66□□□□□ -1.66
COL8A2P25067 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 IMMP1LP3-201ENST00000604197 224 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL8A2P25067 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.66□□□□□ -1.66
COL8A2P25067 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL8A2P25067 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
COL8A2P25067 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
COL8A2P25067 AL360270.2-201ENST00000562952 5985 ntBASIC4.66□□□□□ -1.66
COL8A2P25067 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
COL8A2P25067 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.66□□□□□ -1.66
COL8A2P25067 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL8A2P25067 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL8A2P25067 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL8A2P25067 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL8A2P25067 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL8A2P25067 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
COL8A2P25067 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
COL8A2P25067 AC018628.1-201ENST00000624147 3819 ntBASIC4.65□□□□□ -1.66
COL8A2P25067 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.65□□□□□ -1.66
COL8A2P25067 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL8A2P25067 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL8A2P25067 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms