Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDGFAP04085 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PDGFAP04085 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.01□□□□□ -1.29
PDGFAP04085 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDGFAP04085 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.01□□□□□ -1.29
PDGFAP04085 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.01□□□□□ -1.29
PDGFAP04085 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PDGFAP04085 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
PDGFAP04085 AP003471.1-202ENST00000319051 1988 ntBASIC7□□□□□ -1.29
PDGFAP04085 RAD17P2-201ENST00000451754 1977 ntBASIC7□□□□□ -1.29
PDGFAP04085 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC7□□□□□ -1.29
PDGFAP04085 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7□□□□□ -1.29
PDGFAP04085 IMMTP1-201ENST00000435590 2219 ntBASIC7□□□□□ -1.29
PDGFAP04085 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 AC087203.2-201ENST00000526502 1587 ntBASIC7□□□□□ -1.29
PDGFAP04085 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
PDGFAP04085 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
PDGFAP04085 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7□□□□□ -1.29
PDGFAP04085 EEF1A1P22-201ENST00000559385 1380 ntBASIC7□□□□□ -1.29
PDGFAP04085 AC087045.3-201ENST00000623046 2468 ntBASIC7□□□□□ -1.29
PDGFAP04085 AC022819.1-201ENST00000563495 3910 ntBASIC7□□□□□ -1.29
PDGFAP04085 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 AC007996.1-201ENST00000620414 2821 ntBASIC7□□□□□ -1.29
PDGFAP04085 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC7□□□□□ -1.29
PDGFAP04085 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
PDGFAP04085 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 AC090114.1-201ENST00000393266 448 ntBASIC7□□□□□ -1.29
PDGFAP04085 NPM1P38-201ENST00000403835 865 ntBASIC7□□□□□ -1.29
PDGFAP04085 MTCYBP36-201ENST00000404146 440 ntBASIC7□□□□□ -1.29
PDGFAP04085 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7□□□□□ -1.29
PDGFAP04085 AC233728.2-201ENST00000425348 757 ntBASIC7□□□□□ -1.29
PDGFAP04085 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7□□□□□ -1.29
PDGFAP04085 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC7□□□□□ -1.29
PDGFAP04085 AL513175.1-201ENST00000431492 780 ntBASIC7□□□□□ -1.29
PDGFAP04085 AL662791.1-201ENST00000441992 928 ntBASIC7□□□□□ -1.29
PDGFAP04085 AC114755.5-201ENST00000447760 831 ntBASIC7□□□□□ -1.29
PDGFAP04085 RBMY2EP-202ENST00000456360 940 ntBASIC7□□□□□ -1.29
PDGFAP04085 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7□□□□□ -1.29
PDGFAP04085 RN7SL55P-201ENST00000464534 297 ntBASIC7□□□□□ -1.29
PDGFAP04085 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC7□□□□□ -1.29
PDGFAP04085 RN7SL612P-201ENST00000497704 295 ntBASIC7□□□□□ -1.29
PDGFAP04085 AC108078.3-201ENST00000502633 489 ntBASIC7□□□□□ -1.29
PDGFAP04085 AC108941.1-201ENST00000502853 530 ntBASIC7□□□□□ -1.29
PDGFAP04085 PDLIM1P4-201ENST00000504327 1006 ntBASIC7□□□□□ -1.29
PDGFAP04085 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7□□□□□ -1.29
PDGFAP04085 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC7□□□□□ -1.29
PDGFAP04085 MTCO1P30-201ENST00000515244 580 ntBASIC7□□□□□ -1.29
PDGFAP04085 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC7□□□□□ -1.29
PDGFAP04085 MRPS5P3-201ENST00000515577 166 ntBASIC7□□□□□ -1.29
PDGFAP04085 AC138832.1-201ENST00000522871 556 ntBASIC7□□□□□ -1.29
PDGFAP04085 AC006065.2-201ENST00000536978 211 ntBASIC7□□□□□ -1.29
PDGFAP04085 AC087257.2-201ENST00000538759 928 ntBASIC7□□□□□ -1.29
PDGFAP04085 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 AC008126.1-201ENST00000549019 480 ntBASIC7□□□□□ -1.29
PDGFAP04085 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC7□□□□□ -1.29
PDGFAP04085 AC090312.2-201ENST00000582687 378 ntBASIC7□□□□□ -1.29
PDGFAP04085 AC024085.1-201ENST00000604299 432 ntBASIC7□□□□□ -1.29
PDGFAP04085 RNU6-88P-201ENST00000606801 100 ntBASIC7□□□□□ -1.29
PDGFAP04085 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC7□□□□□ -1.29
PDGFAP04085 HTR1DP1-201ENST00000616500 888 ntBASIC7□□□□□ -1.29
PDGFAP04085 CNTNAP3P1-201ENST00000616657 906 ntBASIC7□□□□□ -1.29
PDGFAP04085 AL139089.1-201ENST00000620372 975 ntBASIC7□□□□□ -1.29
PDGFAP04085 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
PDGFAP04085 AC138649.3-201ENST00000622154 254 ntBASIC7□□□□□ -1.29
PDGFAP04085 AL138693.1-201ENST00000622219 129 ntBASIC7□□□□□ -1.29
PDGFAP04085 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC7□□□□□ -1.29
PDGFAP04085 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7□□□□□ -1.29
PDGFAP04085 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7□□□□□ -1.29
PDGFAP04085 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7□□□□□ -1.29
PDGFAP04085 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
PDGFAP04085 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
PDGFAP04085 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 KYNUP3-201ENST00000574386 1341 ntBASIC7□□□□□ -1.29
PDGFAP04085 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PDGFAP04085 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC6.99□□□□□ -1.29
PDGFAP04085 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
PDGFAP04085 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
PDGFAP04085 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
PDGFAP04085 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 ASNSP6-201ENST00000592770 1618 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms