Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 ABCD1P3-201ENST00000562927 605 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AL390726.4-201ENST00000566538 469 ntTSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AC109446.3-201ENST00000567344 641 ntTSL 3 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 ALOX12-AS1-209ENST00000575889 439 ntTSL 3 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 Metazoa_SRP.194-201ENST00000612213 283 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 BPIFA1-204ENST00000618484 907 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AC129908.1-201ENST00000624553 648 ntBASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 NEDD1-202ENST00000411739 2490 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AC027045.3-201ENST00000635215 2884 ntTSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 METTL16-201ENST00000263092 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 CDHR2-203ENST00000506348 4005 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 COX15-202ENST00000370483 2788 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 CTNNBL1-210ENST00000628103 1958 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 COPA-202ENST00000368069 4664 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 C16orf62-203ENST00000438132 3855 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 CCIN-201ENST00000335119 1941 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 SELP-206ENST00000458599 1945 ntTSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 C12orf66-202ENST00000398055 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 CEPT1-210ENST00000545121 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 CAPS-203ENST00000588776 3750 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 MRPL30-201ENST00000338148 2605 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 NAGA-203ENST00000403363 1856 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 PAK3-212ENST00000519681 2638 ntTSL 5 BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 SYT10-201ENST00000228567 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 PRKAG2-201ENST00000287878 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 ZBTB24-201ENST00000230122 5519 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 RGS3-203ENST00000343817 3689 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AC079779.1-201ENST00000437798 4775 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
KRTAP3-3Q9BYR6 AC022325.1-201ENST00000502748 2199 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 AC093768.1-201ENST00000505987 2173 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 PRICKLE1-205ENST00000548696 3635 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 RANGAP1-202ENST00000405486 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 AC068769.1-201ENST00000474767 2426 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 PWAR1-201ENST00000624188 2414 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 AC104667.1-201ENST00000417947 2057 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 ATP1A3-207ENST00000543770 3427 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 MEIS2-203ENST00000340545 3056 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 AC079612.1-201ENST00000358775 3700 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 TUT1-205ENST00000476907 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 NF1P9-201ENST00000629326 2008 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 CTAGE9-201ENST00000314099 2334 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 LINC00668-204ENST00000580197 2343 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 WSB2-203ENST00000535496 1328 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 AC069061.4-201ENST00000581294 1347 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 NCAM1-226ENST00000619839 2993 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 ZFYVE1-203ENST00000553891 3244 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 CACNG1-201ENST00000226021 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 CHCHD5-201ENST00000324913 691 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 Y_RNA.198-201ENST00000364013 98 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 RNU6-409P-201ENST00000384114 104 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 IGLV3-22-201ENST00000390307 409 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 Y_RNA.587-201ENST00000391210 103 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 AC068287.1-201ENST00000430283 295 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 AC007881.1-201ENST00000437460 187 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 LIN28AP2-201ENST00000445283 458 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 AL135924.1-201ENST00000446146 423 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 AC092421.1-201ENST00000448148 418 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 RN7SL225P-201ENST00000464648 298 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 RN7SL111P-201ENST00000468841 285 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 AC253536.5-201ENST00000506097 347 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 AC003072.1-201ENST00000510957 612 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 SNORA18.4-201ENST00000516440 124 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 ARL2-206ENST00000533729 795 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 CD63-207ENST00000548898 727 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 SRMP2-201ENST00000553832 916 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 ACTG1P15-201ENST00000570019 1063 ntBASIC5.57□□□□□ -1.52
KRTAP3-3Q9BYR6 MED11-203ENST00000575284 652 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms