Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 LINC02436-202ENST00000509017 2186 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LRCH3Q96II8 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
LRCH3Q96II8 AC096745.2-201ENST00000627783 1914 ntBASIC8.41□□□□□ -1.06
LRCH3Q96II8 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 HSPD1P4-201ENST00000547203 1702 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 AL391666.1-201ENST00000442570 2764 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 HERC2P5-201ENST00000562687 3825 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 GC-208ENST00000513476 1567 ntTSL 5 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 CYP1D1P-201ENST00000416662 1433 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 Y_RNA.184-201ENST00000363884 108 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 AL033519.1-201ENST00000407266 307 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 MIR1284-201ENST00000408337 120 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 LINC01347-201ENST00000417964 355 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 AC004690.1-201ENST00000418216 328 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 GAPDHP51-201ENST00000426454 1000 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 BX890604.2-201ENST00000427883 474 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 AC009961.2-201ENST00000435771 251 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 CYCSP11-201ENST00000436426 315 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 RPL7P54-201ENST00000438336 674 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 RN7SL688P-201ENST00000471754 275 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 H3F3AP5-201ENST00000475267 429 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 RPL5P12-201ENST00000477071 851 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 RN7SL502P-201ENST00000481857 290 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 GAPDHP39-201ENST00000481866 979 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 AC034159.1-201ENST00000513885 583 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 IGHVIII-13-1-201ENST00000517613 291 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 LY96-202ENST00000518893 430 ntTSL 3 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 AP003122.3-201ENST00000526316 255 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 SDHCP4-201ENST00000532834 510 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 AC008269.2-201ENST00000561915 1105 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 AC061975.3-201ENST00000583209 244 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC8.4□□□□□ -1.06
LRCH3Q96II8 DYNLL1P1-201ENST00000595442 269 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 AL390058.1-201ENST00000603834 629 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 AC010591.1-201ENST00000603941 649 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 AC113194.1-201ENST00000606037 500 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 IGKV1OR1-1-201ENST00000613775 347 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 AL683826.1-201ENST00000624104 627 ntBASIC8.4□□□□□ -1.06
LRCH3Q96II8 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
LRCH3Q96II8 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
LRCH3Q96II8 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
LRCH3Q96II8 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
LRCH3Q96II8 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
LRCH3Q96II8 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
LRCH3Q96II8 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC8.4□□□□□ -1.07
LRCH3Q96II8 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
LRCH3Q96II8 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.07
LRCH3Q96II8 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LRCH3Q96II8 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
LRCH3Q96II8 AC010533.1-201ENST00000624875 2105 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LRCH3Q96II8 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LRCH3Q96II8 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LRCH3Q96II8 ACTBP13-201ENST00000423971 3959 ntBASIC8.39□□□□□ -1.07
LRCH3Q96II8 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LRCH3Q96II8 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.39□□□□□ -1.07
LRCH3Q96II8 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms